Query= MSMg01no325_d02.b1 MSMg01no325_d02.b1 CHROMAT_FILE:
MSMg01no325_d02.b1 PHD_FILE: MSMg01no325_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:40 2005
(556 letters)
>mm_chr11_70014453_70015408
Length = 956
Score = 917 bits (474), Expect = 0.0
Identities = 534/554 (96%), Gaps = 2/554 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctgtctcactctcccgcgtcctgggctcacaggcatgcacctcctcccaagg 63
|||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 204 ggaattctctgtctcattctcccgagtcctgggctcacaggcatgcacctcctcacaagg 263
Query: 64 tctttttgactggcttgtttggctggctggctggttggtctttcaaggccaggtctctct 123
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 264 tctttttgactggcttgtttggctggctggttggttggtctttcaaggccaggtctctct 323
Query: 124 gtgtagccctggctgacctggaacttgctctaaagaccaggctggcctcaaactcacaga 183
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtgtagccctggctgtcctggaacttgctctaaagaccaggctggcctcaaactcacaga 383
Query: 184 gatcagcctgcctttacctctggagtgctggaattaaaagcgtgcaccaccacattctgc 243
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||
Sbjct: 384 gatcagcctgcctttacctctggaatgctggaattaaaagcatgcaccaccacattcggc 443
Query: 244 ttgtttgcttgtttttaattcacttagtgttttcagataaaatatcttgttgtgttgctt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgtttgcttgtttttaattcacttagtgttttcagataaaatatcttgttgtgttgctt 503
Query: 304 ctcatggccctaaactctggacttaaccggttctcccaccttaactgccagaatagccga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctcatggccctaaactctggacttaaccggttctcccaccttaactgccagaatagccga 563
Query: 364 ggtaacacccgcgcacttctgggtgtgggttttccgtattatttttcttgggaggctgaa 423
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggtaacaggtgtgcacttctgggtgtgggttttccgtattatttttcttgggaggctgaa 623
Query: 424 ctcg-cctatctgcggacgctgaaaacgctaggtgtttgcttttctggggctcggtcgag 482
|||| || |||||| |||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 624 ctcgtcc-atctgcagacgctgaaaacactaggtgtttgcttttctggggctcggtcaag 682
Query: 483 ggaggaagaagaaggaatgcaggaccaaggatgcagaggccacgaccgggactttgaatt 542
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 683 cgaggaagaagaaggaatgcaggaccaaggatgcagaggccacgaccatgactttgaatt 742
Query: 543 tgaatttgggagct 556
||||||||||||||
Sbjct: 743 tgaatttgggagct 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_d02.g1 MSMg01no325_d02.g1 CHROMAT_FILE:
MSMg01no325_d02.g1 PHD_FILE: MSMg01no325_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:40 2005
(624 letters)
>mm_chr11_70194847_70195870
Length = 1024
Score = 656 bits (339), Expect = 0.0
Identities = 345/347 (99%)
Strand = Plus / Minus
Query: 278 tgatgctgcttggacacacacctctcctatccttgtggctgggatcttgctatcatccag 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 tgatgctgcttggacacacacctctcctatccttgtggctgggatcttgctatcatccag 965
Query: 338 gaactccccttgccaaggtccttgatcgcttccgcttttcctgcttcctggaccctgtgt 397
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 gaactccctttgccaaggtccttgatcgcttccgcttttcctgcttcctggaccctgtgt 905
Query: 398 tcctctgtcttggtttattttctgtgtcatcggggcatcccttccagtgacttcttgaga 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 tcctctgtcttggtttattttctgtgtcatcggggcatcccttccagtgacttcttgaga 845
Query: 458 aaggatgtgtaggcggcagaatggtccagttctcattcttaccagaacatggatacggtc 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 aaggatgtgtaggcggcagaatggtccagttctcattcttaccagaacatggatacggtc 785
Query: 518 atgtcacatttccctggcaggcgcagggggggtgcagtcagaaattaatatccctcgaga 577
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 784 atgtcacatttccctggcaggtgcagggggggtgcagtcagaaattaatatccctcgaga 725
Query: 578 gcctgtagacgtcggcttgtttttctagtgtccagtgttgtcagtga 624
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 gcctgtagacgtcggcttgtttttctagtgtccagtgttgtcagtga 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
