Query= MSMg01no325_o03.b1 MSMg01no325_o03.b1 CHROMAT_FILE:
MSMg01no325_o03.b1 PHD_FILE: MSMg01no325_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:28 2005
(558 letters)
>mm_chr11_88120321_88121278
Length = 958
Score = 1019 bits (527), Expect = 0.0
Identities = 548/555 (98%), Gaps = 2/555 (0%)
Strand = Plus / Plus
Query: 5 gaattcacctgtatccccagccagacttcccacagactgtactcctgttccataagtgag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacctgtatccccagccagacttcccacagactgtactcctgttccataagtgag 264
Query: 65 tcctgaagtgccaaccttggtttccagtctgtgtttctgtggcttttgttgttctggtat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcctgaagtgccaaccttggtttccagtctgtgtttctgtggcttttgttgttctggtat 324
Query: 125 agttgctgtcctgctctgtgtgggctctgccttgcttacaggaaggaaagacttgtcaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agttgctgtcctgctctgtgtgggctctgccttgcttacaggaaggaaagacttgtcaat 384
Query: 185 gtgccattttctcctgaagctctgcattcttctgcctcttcaggagagctcaattctgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgccattttctcctgaagctctgcattcttctgcctcttcaggagagctcaattctgta 444
Query: 245 aagcacagagttgcttggacaatggccgccttaacagctatggaaatggtcccggggaga 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 aagcacagagttgcttggacaatggccgccttaacagctatggaaatggttccggggaga 504
Query: 305 gcacacaactcatattagcacatggttacgtgcactggaatccaaaaggatttgtgtgtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcacacaactcatattagcacatggttacgtgcactggaatccaaaaggatttgtgtgtt 564
Query: 365 attccaggtacccctcttaccggaagagagtcctgaggttactatccatcccctgccaag 424
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attccagatgcccctcttaccggaagagagtcctgaggttactatccatcccctgccaag 624
Query: 425 agccattgtctacaaagaacagggaagctaggacagggtttggaaaacttgcgatctggg 484
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agccattgtctacaaagagcagggaagctaggacagggtttggaaaacttgcgatctggg 684
Query: 485 ggcccatctaaacttttccagagggctcaggacagtcctacccagctctccttccag-ca 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 685 ggcccatctaaacttttccagagggctcaggacagtcctacccagctctccttc-aggca 743
Query: 544 gggtcggaaggaagc 558
||||||||| |||||
Sbjct: 744 gggtcggaaagaagc 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_o03.g1 MSMg01no325_o03.g1 CHROMAT_FILE:
MSMg01no325_o03.g1 PHD_FILE: MSMg01no325_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:28 2005
(342 letters)
>mm_chr11_88276274_88277015
Length = 742
Score = 654 bits (338), Expect = 0.0
Identities = 341/342 (99%)
Strand = Plus / Minus
Query: 1 atgtcaattcctgtgacttgaagacagccattttcttctcataatagacctcgttaaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atgtcaattcctgtgacttgaagacagccattttcttctcataatagacctcgttaaccc 483
Query: 61 gtctctatactgactggcgcttttttattatgacgattggaggacttcagtctgaatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gtctctatactgactggcgcttttttattatgacgattggaggacttcagtctgaatgtt 423
Query: 121 agaacgtcaggtttccaagtgcctgctggagaagcgggtgtataatgacagtcttccatg 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agaacgtcgggtttccaagtgcctgctggagaagcgggtgtataatgacagtcttccatg 363
Query: 181 gcagtaatggtggccagcgcctgctctggcacagacattattagatctgagtctcctgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcagtaatggtggccagcgcctgctctggcacagacattattagatctgagtctcctgaa 303
Query: 241 gggacaatttgtaatgacctggtatctatggtgatggggggtagggaacaggaaggcagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gggacaatttgtaatgacctggtatctatggtgatggggggtagggaacaggaaggcagc 243
Query: 301 agaagggacccttatcacccccaccatcccatcagtgtgaga 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agaagggacccttatcacccccaccatcccatcagtgtgaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
