Query= MSMg01no325_p14.b1 MSMg01no325_p14.b1 CHROMAT_FILE:
MSMg01no325_p14.b1 PHD_FILE: MSMg01no325_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:35 2005
(694 letters)
>mm_chr11_89866881_89867975
Length = 1095
Score = 1321 bits (683), Expect = 0.0
Identities = 689/691 (99%), Gaps = 1/691 (0%)
Strand = Plus / Minus
Query: 5 gaattctttgcctttacccattctaataactatacagtaatacctcactctggttttaat 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 gaattctttgcctttagccattctaataactatacagtaatacctcactctggttttaat 994
Query: 65 gcaaactgtctgaaggaccaataatgccgaacctctttccctgtcatttggtaatagctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 gcaaactgtctgaaggaccaataatgccgaacctctttccctgtcatttggtaatagctt 934
Query: 125 ctaggtgagatacataattaaatattatattcacttttgttttccatagg-tttttttta 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 933 ctaggtgagatacataattaaatattatattcacttttgttttccataggttttttttta 874
Query: 184 tattgacactgaggagttcatatccttgtttttactgcacagttaaacaacaccaagtta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 tattgacactgaggagttcatatccttgtttttactgcacagttaaacaacaccaagtta 814
Query: 244 atcaatctcttattgacctcttaaacagaactctgcctcaccttgtgctgttttccgtgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 atcaatctcttattgacctcttaaacagaactctgcctcaccttgtgctgttttccgtgt 754
Query: 304 tgttgaacattttcattacgtttcagcttcctgagtccttctcaccctcgctcctctcta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tgttgaacattttcattacgtttcagcttcctgagtccttctcaccctcgctcctctcta 694
Query: 364 tctcccccaccgcctactcaccccacaccccaccttcctgttctcttcttctggaattca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tctcccccaccgcctactcaccccacaccccaccttcctgttctcttcttctggaattca 634
Query: 424 agtcagaaattcttggcagttctgcatggctagatggaccttagtgagtggcacattcac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 agtcagaaattcttggcagttctgcatggctagatggaccttagtgagtggcacattcac 574
Query: 484 acttagtttctctatctcctcatggtgttctctcagggtcacctcttcacttctgtatca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 acttagtttctctatctcctcatggtgttctctcagggtcacctcttcacttctgtatca 514
Query: 544 ctcctacattatagtaagccagccatttgatgatgctaagttttcatttcaataactgtt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ctcctacattatagtaagccagccatttgatgatgctaagttttcatttcaataactgtt 454
Query: 604 ttccatttgtagaaattctactgtgtgtgtgtgttctgttcttttattacagcctgggac 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttccatttgtagaaattctactgtgtgtgtgtgttctgttcttttattacagcctgggac 394
Query: 664 tccttttggattgctataaatgcaccaacta 694
|||||||||||||||||||||||||||||||
Sbjct: 393 tccttttggattgctataaatgcaccaacta 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1095
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1085
Effective search space: 742140
Effective search space used: 742140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_p14.g1 MSMg01no325_p14.g1 CHROMAT_FILE:
MSMg01no325_p14.g1 PHD_FILE: MSMg01no325_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:35 2005
(280 letters)
>mm_chr11_89816306_89816985
Length = 680
Score = 526 bits (272), Expect = e-154
Identities = 278/280 (99%)
Strand = Plus / Plus
Query: 1 aaacctgcaggtgtgctacacagttttctatgttttcttccttatctgaagcctgtgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaacctgcaggtgtgctacacagttttctatgttttcttccttatctgaagcctgtgaca 260
Query: 61 ctgtgactattctacagagcatcattactgtctagagggatactgtaaaatcatacggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ctgtgactattctacagagcatcattactgtctagagggatactgtaaaatcatatggaa 320
Query: 121 catcttttcaaaggaaacttgagatgacagtcatataaggaaataaataaggtaaaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catcttttcaaaggaaacttgagatgacagtcatataaggaaataaataaggtaaaattc 380
Query: 181 aatcaagcacaattaatttttttgtttgtttggagaaaagaaaatgacaactactatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcaagcacaattaatttttttgtttgtttggagaaaagaaaatgacaactactatttt 440
Query: 241 ggaggatttcagggacatatatatatatatatatatatat 280
||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 ggaggatttcagggatatatatatatatatatatatatat 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
