Query= MSMg01no327_a11.b1 MSMg01no327_a11.b1 CHROMAT_FILE:
MSMg01no327_a11.b1 PHD_FILE: MSMg01no327_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:50 2005
(372 letters)
>mm_chr11_78010380_78011147
Length = 768
Score = 681 bits (352), Expect = 0.0
Identities = 358/362 (98%), Gaps = 4/362 (1%)
Strand = Plus / Minus
Query: 8 gaattctaactgctctctacatcttttactcctgcctgccatgtgccggaagtgacgtca 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gaattctaactgctctctacatcttttactcctgcctgccatgtgccggaagtgacgtca 399
Query: 68 taggccaccaggccttgcttccatctgttcttcagaatgaagtgtggaccttttctcatg 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 taggccaccaggccttgcttccatctgttcttcagaatgaagtgtggaccttttctcatg 339
Query: 128 cccttaggagccaggacctaggcccttccctcaccgagcgttcttgccacctctcatgac 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cccttaggagccaggacctaggcccttccctcaccgagcgttcttgccacctctcatgac 279
Query: 188 catctgtctcccctgcctctctctctctctctctcccatgttttatctgctcaactctgg 247
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 catctgtctcccctgc----ctctctctctctctcccatgttttatctgctcaactctgg 223
Query: 248 gaaaatgctgttgctcataatggcacacagctgtaatcccagaactcggtgtgctgacac 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gaaaatgctgttgctcataatggcacacagctgtaatcccagaactcggtgtgctgacac 163
Query: 308 agggctagcttgggctacacagcaaggccttgcagcagactaaccccagtactgtccaag 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 agggctagcttgggctacacagcaaggccttgcagcagactaaccccagtactgtccaag 103
Query: 368 tg 369
||
Sbjct: 102 tg 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 768
Length adjustment: 9
Effective length of query: 363
Effective length of database: 759
Effective search space: 275517
Effective search space used: 275517
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no327_a11.g1 MSMg01no327_a11.g1 CHROMAT_FILE:
MSMg01no327_a11.g1 PHD_FILE: MSMg01no327_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:51 2005
(346 letters)
>mm_chr11_77844584_77845329
Length = 746
Score = 659 bits (341), Expect = 0.0
Identities = 344/345 (99%)
Strand = Plus / Plus
Query: 1 attccctggtctcagaaatctgaccctgactcccacatatagttgtattcttgtccctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attccctggtctcagaaatctgaccctgactcccacatatagttgtattcttgtccctgc 260
Query: 61 cactctgcttccacttcaggaaggacttcttaaacctccaaaggcagaaaggaactacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactctgcttccacttcaggaaggacttcttaaacctccaaaggcagaaaggaactacct 320
Query: 121 gtccttcactgtcctaggcaaggtcctgcttggaatgcccacatccctagctgtccctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtccttcactgtcctaggcaaggtcctgcttggaatgcccacatccctagctgtccctgc 380
Query: 181 ccagcttaccctcagtcactgtttccagagtaatggagtgtctacctacctagtcttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagcttaccctcagtcactgtttccagagtaatggagtgtctacctacctagtcttgct 440
Query: 241 acctgtgatccgttctagaaacaaattaccgccttttcgaaagcagaggtcatggagtaa 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctgtgaaccgttctagaaacaaattaccgccttttcgaaagcagaggtcatggagtaa 500
Query: 301 caaccatgtaatacccactgtttcggagtttgaggaaggaggatc 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaccatgtaatacccactgtttcggagtttgaggaaggaggatc 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
