XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAGCT
ACTCATGACCATCAGATTTCAAAGACTGCATTGAGACCTTTGAATAAGCA
AAGGTTTAGCAGGTGAAAGAAATTAAAGGAATTAACTGAAAGTTTTAGAA
AGTTGGAGAGGTCAAAACAAGGGGAGATTTACAGAATGTTCCCCTTTGCC
AGGAATGTTAATTGGCAACTATATTATATGAGAAAAACATTCTCACATTG
TAAGTATGAAATTATTTAAATTATCCAAAGGAAAGAATGTGATTCCCCCA
ACCCCACCCCAGGACACAAATGTCAAAAATATCCTAGTAAAAACAAATTT
GTCTTGTAAAAATATGAAGCAATTGATTCAAATATTTGGCCAGTTACACT
TTAAAATTTAAAATACCGCAACTTTGAAACTGTTGAATATTTAATTCGAG
CTAAATTTGTAAGTTTCTCGAGTAATGAAATTATAGGCAAAAAGAAGCAA
AGAGTTCAGCACAATAGATGAGGTGCATAAACAATAGCTTACAGAAATTA
TAAATGTCCTGTTAAATACGAAAATAACAGCTCTCACATTCATAATAAGA
GAAATGCAAATTAAGGCTTTAATGAGATACTAATTTTCAAGTATCTCTTG
GCAAGCAACCGCATGTTAATTGGAAGATAAGCTAAAGGACCTTGGGATGA
GGGCAGTTTCACAGGTTCATNAAATTCCAAAACAACCCTTTTTAAGCTGA

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCTGGATGTTTTGAGTTAGGATATTTTTGCATTTT
GCATTTTCTTTGATTGTTGTGCCAATGTTCTCTATGGAATCTTCTGCTCC
TGAGAGTCTCTCTTCCATCTCTTCTATTCAGTTGCTGATGCTCGAATCTA
TGGTTACAGATTTCTTTCCTAGGGTTTCTTTCTCCAGCCTTGCCTCATTT
CGGGTTTTCTTTATTGTGTCTACTTCCCTTTTTAGGTCTAGTATGGTTTT
GTTCATTTCCATCACCTGTTTGAATGTGTTTTCCTGTTTTTCTTTAAGGA
CTTCTACCTGTTTGGTTGCGTTTTTGCGTTTTTCTTTAAGGACCTATAAC
TCTTTAGTTGTGCCCACCCCNATTTCTTTAATTGAGTTATTAAAGTCCCT
CTTGATGTCTTCTTACATCATCATGAGATATGCTTTTATATCCGAGTCCA
GATTTCCTTTTGTGTTGCCCTGTCCATTACCTTCCGATTTGTCCTCGCCT
CCTTTTTTCCGATGCCGACCTGTCTTGTTCCTTTTTTGCTCCTCCCACCT
CTTTCTCATTTCCTTTTTCCCCACATCTTCTTTCTTATTTCCTGGTTTTT
ACCATCTATCATTTTTTCTTTTTCCCCCTCTCATATCTTACTTCTTTTCC
CCTTTATTCCCCCTCGCCTTTCCTTTTCCCTTATATTATTTAATAGATCG
CTCCCCCTCCACCTTTCTTTTTATTTTG

Query= MSMg01no327_d19.b1 MSMg01no327_d19.b1 CHROMAT_FILE:
MSMg01no327_d19.b1 PHD_FILE: MSMg01no327_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:06 2005
         (648 letters)



>mm_chr11_13601302_13602347
          Length = 1046

 Score = 1158 bits (599), Expect = 0.0
 Identities = 636/651 (97%), Gaps = 8/651 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagatttcaaagactgcattgagacctttgaataagcaaaggtttagcaggtgaaagaaa 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 cagatttcaaagactgcattgagacctttgaataagcaaaggtttagcaggtgacagaaa 260

                                                                       
Query: 61  ttaaaggaattaactgaaagttttagaaagttggagaggtcaaaacaaggggagatttac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaaggaattaactgaaagttttagaaagttggagaggtcaaaacaaggggagatttac 320

                                                                       
Query: 121 agaatgttcccctttgccaggaatgttaattggcaactatattatatgagaaaaacattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaatgttcccctttgccaggaatgttaattggcaactatattatatgagaaaaacattc 380

                                                                       
Query: 181 tcacattgtaagtatgaaattatttaaattatccaaaggaaagaatgtgatt---ccccc 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||
Sbjct: 381 tcacattgtaagtatgaaattatttaaattatccaaaggaaagaatgtgattttcccccc 440

                                                                       
Query: 238 aaccccaccccaggacacaaatgtcaaaaatatcctagtaaaaacaaatttgtcttgtaa 297
           ||||   || ||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 aacc---cctcagga-acaaatgtcaaaaatatcttagtaaaaacaaatttgtcttgtaa 496

                                                                       
Query: 298 aaatatgaagcaattgattcaaatatttggccagttacactttaaaatttaaaataccgc 357
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  | 
Sbjct: 497 aaatatgaagcaattaattcaaatatttggccagttacactttaaaatttaaaataatg- 555

                                                                       
Query: 358 aactttgaaactgttgaatatttaattcgagctaaatttgtaagtttctcgagtaatgaa 417
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aactttggaactgttgaatatttaattcgagctaaatttgtaagtttctcgagtaatgaa 615

                                                                       
Query: 418 attataggcaaaaagaagcaaagagttcagcacaatagatgaggtgcataaacaatagct 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 attataggcaaaaagaagcaaagagttcagcacaatagatgaggtgcataaacaatagct 675

                                                                       
Query: 478 tacagaaattataaatgtcctgttaaatacgaaaataacagctctcacattcataataag 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tacagaaattataaatgtcctgttaaatacgaaaataacagctctcacattcataataag 735

                                                                       
Query: 538 agaaatgcaaattaaggctttaatgagatactaattttcaagtatctcttggcaagcaac 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 agaaatgcaaattaaggctttaatgagatactaattttcaagtatctcttggcaagcaac 795

                                                              
Query: 598 cgcatgttaattggaagataagctaaaggaccttgggatgagggcagtttc 648
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 cgcatgttaattggaagataagctaaaggaccttgggatgagggcagtttc 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1046
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1036
Effective search space:   660968
Effective search space used:   660968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)