Query= MSMg01no327_e10.b1 MSMg01no327_e10.b1 CHROMAT_FILE:
MSMg01no327_e10.b1 PHD_FILE: MSMg01no327_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:09 2005
(141 letters)
>mm_chr11_114815953_114816493
Length = 541
Score = 257 bits (133), Expect = 2e-73
Identities = 139/141 (98%)
Strand = Plus / Minus
Query: 1 aacactgtcttggtggagctccacaagaagagagaaaagtaagaagatggtatccagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aacactgtcttggtggagctccacaagaagagagaaaagtaagaagatggtatccagcac 282
Query: 61 agtaagcaacattttgtattcatgctagcactgggtctaaacttcatctttttgaaactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 281 agtaagcaacattttgtattcatgctagcactgggtctaaacttcatctttttgaaattg 222
Query: 121 ttgctgtacgtgtgaaaggat 141
|||||||| ||||||||||||
Sbjct: 221 ttgctgtaggtgtgaaaggat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 541
Length adjustment: 8
Effective length of query: 133
Effective length of database: 533
Effective search space: 70889
Effective search space used: 70889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no327_e10.g1 MSMg01no327_e10.g1 CHROMAT_FILE:
MSMg01no327_e10.g1 PHD_FILE: MSMg01no327_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:09 2005
(279 letters)
>mm_chr11_114635167_114635845
Length = 679
Score = 489 bits (253), Expect = e-143
Identities = 275/287 (95%), Gaps = 8/287 (2%)
Strand = Plus / Plus
Query: 1 ctgatcacatttgcactgacctaagagccaggccagagtgaagaccaggagggcagaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgatcacatttgcactgacctaagagccaggccagagtgaagaccaggagggcagaccc 260
Query: 61 acagctgctgggtcctctgctgagttaggcccaagggcttcatatgttggagacctaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagctgctgggtcctctgctgagttaggcccaagggcttcatatgttggagacctaatc 320
Query: 121 ccaggaccctaaacaagggctttttttaggtgtgcatactcatggacttag--------g 172
||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 321 ccaggaccctaaacaagggctttttttaggtatgcatactcatggacttagttacttagg 380
Query: 173 taagaatgagggcattgtaagaggaagatggacccttaagacagcaggtttctgtcaggc 232
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagaatgagggcatagtaagaggaagatggacccttaagacagcaggtttctgtcaggc 440
Query: 233 tgggcatgtagctcggttgttagagtgcttgtctgtcatgcatgaag 279
||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 tgggcatgtagctcggttggcagagtgcttgtctgtcatgcatgaag 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
