Query= MSMg01no328_a02.b1 MSMg01no328_a02.b1 CHROMAT_FILE:
MSMg01no328_a02.b1 PHD_FILE: MSMg01no328_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:01 2005
(337 letters)
>mm_chr11_26834955_26835691
Length = 737
Score = 644 bits (333), Expect = 0.0
Identities = 336/337 (99%)
Strand = Plus / Plus
Query: 1 agcttgcacagtgagcattcaacaaataatcttaagacccctaatcactgctgtagattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcttgcacagtgagcattcaacaaataatcttaagacccctaatcactgctgtagattg 260
Query: 61 aaaggggattccccatttggggatgagatttgtaaataccatggtatatgtaaactgcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggggattccccatttggggatgagatttgtaaataccatggtatatgtaaactgcac 320
Query: 121 aatgctttcaattccactctacagaaatgagtgcattatcgattccatgtgtttgtgctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgctttcaattccactctacagaaatgagtgcattatcgattccatgtgtttgtgctg 380
Query: 181 aaaagtgcacacatcagttctgtgcagtccagagcactgtattctagctacctggattcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaagtgcacacatcagttctgtgcagtccagagcactgtattctagctacctggattcc 440
Query: 241 tttcaataatgcagatttttgaatccttaagttttgtctaggacccaacattctacattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcaataatgcagatttttgaatccttaagttttgtctaggacccaacattctacattt 500
Query: 301 tggttaagcctccaagacatacctactcctgtgctgg 337
|||||||||||||||||||||| ||||||||||||||
Sbjct: 501 tggttaagcctccaagacatacatactcctgtgctgg 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_a02.g1 MSMg01no328_a02.g1 CHROMAT_FILE:
MSMg01no328_a02.g1 PHD_FILE: MSMg01no328_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:01 2005
(507 letters)
>mm_chr11_27012251_27013157
Length = 907
Score = 772 bits (399), Expect = 0.0
Identities = 446/465 (95%), Gaps = 8/465 (1%)
Strand = Plus / Minus
Query: 1 agagtaaaagagaatgaaaactgtccatgcttatggttggaaggaccttgctaccttcca 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 463 agagtaaaagagaatgaaaactgtccatgcttatgattggaaggaccttgctaccttcca 404
Query: 61 actgagcatcagtctccaccacagagtgtgagaggaaaggtgtcttaaatcaggaagtaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 403 actgagcatcagtctccaccacagagtgtgagaggaaaggtgtcttaaatcaggcagtaa 344
Query: 121 aggcagctcaaactggacacacctgagtaaaacattaggctgaaaaggaaggcagtattg 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aggcagctcaaactggacacagctgagtaaaacattaggctgaaaaggaaggcagtattg 284
Query: 181 ttcttcagaaagtctcctgctactgtgacctaaggccatcattagctcttttgacaactg 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 283 ttcttcagaaagtctcctgctactgtgacctaaggacatcattagctcttttgacaactg 224
Query: 241 caagtttatatagaaaattataactttaattatttcaaaacctatttttaatgatggttc 300
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 223 caagtttatatagaaacttataactttaattatttcaaaacctacttttaatgatggttc 164
Query: 301 ttaaaatgctttaaccttccttgtagcccattacccaccagagggagtgggggggaa--- 357
||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||
Sbjct: 163 ttaaaatgctttaaccttccttgtaacccattacccaccaaagggagtggggg--aaaaa 106
Query: 358 --ggataa-gggcaaatggaccttttagaaagagttttggagcaactctcatttgtattg 414
|||||| |||||||||||||||||||||||| |||||||||||||||||| ||| |||
Sbjct: 105 aaggataaagggcaaatggaccttttagaaagatttttggagcaactctcatctgtgttg 46
Query: 415 tctggaaatcaacagttcacagcttagcagtggcagcttgatcaa 459
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 tctggaaatcaacagttcacagcttagcagtggcagcttgatcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
