Query= MSMg01no328_f09.b1 MSMg01no328_f09.b1 CHROMAT_FILE:
MSMg01no328_f09.b1 PHD_FILE: MSMg01no328_f09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:28 2005
(317 letters)
>mm_chr11_66140858_66141574
Length = 717
Score = 559 bits (289), Expect = e-164
Identities = 310/317 (97%)
Strand = Plus / Plus
Query: 1 caatcattgtgttaattctgatgcaaccacatagcactgtacaatgagggacagagccat 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 caatcattgtgttaattctgatgcaaccacatagcactgtactatgagggacagagccat 260
Query: 61 gaaggggagtgaatactgactcccagtcccttctgctactgcctgtgtggaaggtaccat 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaggagagtgaatactgactcccagtcccttctgctactgcctgtgtggaaggtaccat 320
Query: 121 tgtctaccaagggaattgtactccctaggaacaacaacagtcttcactgatgtaggggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtctaccaagggaattgtactccctaggaacaacaacagtcttcactgatgtaggggag 380
Query: 181 acacttgtgagaaccaacgttgaactgatgagaaaagctaggagaatccagcctgtcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacttgtgagaaccaacgttgaactgatgagaaaagctaggagaatccagcctgtcaag 440
Query: 241 gggagaaggtgtgttaatttacctctaacttgcactacaagctacattctagttactctt 300
||||||||||| | |||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 441 gggagaaggtgcgggaatttacctctaacttgcaccacaagctacattctagttcctctt 500
Query: 301 catattgcccagtcatg 317
|||||||||||||||||
Sbjct: 501 catattgcccagtcatg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_f09.g1 MSMg01no328_f09.g1 CHROMAT_FILE:
MSMg01no328_f09.g1 PHD_FILE: MSMg01no328_f09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:28 2005
(229 letters)
>mm_chr11_66336910_66337538
Length = 629
Score = 385 bits (199), Expect = e-111
Identities = 219/231 (94%), Gaps = 10/231 (4%)
Strand = Plus / Minus
Query: 1 caaagcaaagaatggcttagaggcaggtgcctttctgaaacagatgtgcattgtttctca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 caaagcaaagaatggcttagaggcaggtgcctttctgaaacagatgtgcattgtttctcg 367
Query: 61 tgtgttacctctgacccaggactcggggactcatctcctctttcctgtctcgactcaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 366 tgtgttacctctgacccaggactcggggactcatctcctctttcctgtctcgactcagta 307
Query: 121 agcccacgttggctctcaccactttctagttgattctca-----tttttatctcttgggg 175
||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 306 agcccacgttggctctcaccactttctagttgattctcacgaac-----atctcttgggg 252
Query: 176 tttctccctgcctcctccactcctccccttctcctcccccatccccgcact 226
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tttctccctgcctcctccactcctccccttctcctcccccatccccgcact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
