Query= MSMg01no329_e02.b1 MSMg01no329_e02.b1 CHROMAT_FILE:
MSMg01no329_e02.b1 PHD_FILE: MSMg01no329_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:38 2005
(439 letters)
>mm_chr11_58927229_58928062
Length = 834
Score = 762 bits (394), Expect = 0.0
Identities = 413/422 (97%), Gaps = 5/422 (1%)
Strand = Plus / Minus
Query: 18 gaacaaaacccgtgaccaccacagaacacatctgaatacactgaaattgaaaactgtggt 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gaacaaaacccgtgaccaccacagaacacatctgaatacactgaaattgaaaactgtggt 775
Query: 78 ttagtctggtgtgatggttcagcaggtagaggtgcttgctgaataagtctcatgaccgac 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ttagtctggtgtgatggttcagcaggtagaggtgcttgctgaataagtctcatgaccgac 715
Query: 138 ctgagttcagtccctggaacccacgtgtgtaaggaagaagaggaccaactccacaaagtg 197
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 714 ctgagttcagtccctggaacccacgtgtgtaaggaagaagagaaccaactccacaaagtg 655
Query: 198 gtcctctggcctccacctgcaagtgtggaatacctcctcccccatatcacacgcaacaat 257
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 654 gtcctctggcctccacctgcaagtgtggaatgcctcctcccccatatcacacgcaacaat 595
Query: 258 aatgctaagtaaaaataaaaaataaacccagggatttcagcagagccttgcataaatgac 317
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aatgctaagtaaaaata-----taaacccagggatttcagcagagccttgcataaatgac 540
Query: 318 agaagacaaacaacgaaacatgggaagtatctggtggtgtgtgtggttgtcagtccccta 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 agaagacaaacaacgaaacatgggaagtatctggtggtgtgtgtggttgtcagtccccta 480
Query: 378 gtgtgaaaatacacacagagatcctagagtgcgtgcctagaagacagtgctattgaagtt 437
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 479 gtgtgaaaatacacacagagatcctaaagtgcgtgcctagaagacagtgctattgaaatt 420
Query: 438 ta 439
||
Sbjct: 419 ta 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 834
Length adjustment: 9
Effective length of query: 430
Effective length of database: 825
Effective search space: 354750
Effective search space used: 354750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_e02.g1 MSMg01no329_e02.g1 CHROMAT_FILE:
MSMg01no329_e02.g1 PHD_FILE: MSMg01no329_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:38 2005
(538 letters)
>mm_chr11_58755447_58756384
Length = 938
Score = 1002 bits (518), Expect = 0.0
Identities = 533/538 (99%)
Strand = Plus / Plus
Query: 1 attatagggctctgaaataaatgagtgattgactatcaagtggatagacatagagccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 attatagggctctgaaataaatgagtgattgactatcaagtggatagacgtagagccctg 260
Query: 61 acattgatgatgaacaggacagtgaagtggagggatcaggcccagcctggatgacagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 acattgatgatgaacaggacagtgaagtggagggatcaggcccagcctggatgacaggca 320
Query: 121 ggggattgaagtgcctggacaataaggaagaggttgaatgacagggacctatctatccat 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 ggggattgaagtgcctggacaataaggaaaaggttgaatgacagggacctatctatccat 380
Query: 181 ttaccttacaatcagaataaaagtaattggtctgatacaattttctgtatttgtgatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaccttacaatcagaataaaagtaattggtctgatacaattttctgtatttgtgatggt 440
Query: 241 aaaaccccaaaaaacaatcaaaagggagattttgtgaagaacagtatttagaaagggcat 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaccccaaaaaacaaccaaaagggagattttgtgaagaacagtatttagaaagggcat 500
Query: 301 cacatcaggaggggaacacaagccactgtaacaggggggctgaggcaagtacatctgaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacatcaggaggggaacacaagccactgtaacaggggggctgaggcaagtacatctgaga 560
Query: 361 agcagggaaggagcatcacacgagatgctccaaaacaagcctctgtggccacgagagagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcagggaaggagcatcacacgagatgctccaaaacaagcctctgtggccacgagagagc 620
Query: 421 tgtgggcaacctccctgcagtatcctgtgtatatcgtggcagtaccctctgagcctctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 tgtgggcaacctccctgcagtatcctgtgtatatcgtggcagtaccctctgagtctctga 680
Query: 481 gattgtcttcattgggcacgcctgctttacaattacatatttttggttagtgctggcc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gattgtcttcattgggcacgcctgctttacaattacatatttttggttagtgctggcc 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
