Query= MSMg01no329_g23.b1 MSMg01no329_g23.b1 CHROMAT_FILE:
MSMg01no329_g23.b1 PHD_FILE: MSMg01no329_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:53 2005
(289 letters)
>mm_chr11_58434378_58435067
Length = 690
Score = 491 bits (254), Expect = e-143
Identities = 269/274 (98%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 6 gaattcacaatgccttaacgtcattcccaagacctgtgagagcctaaacaagacagaatc 65
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcacaatgccataatgtcattcccaagacctgtgagagcctaaacaagacagaatc 265
Query: 66 tctcatggagaagggaggcaggcatgaagtttcacctctagccaaggagctactgttagc 125
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 266 tctcatggagaagggaggcaggcatgaagtttcacccctagccaaggagctactgttagc 325
Query: 126 tgctgagagttgaactgtcagttttctctaaagtgtagccattgataactcaagacatac 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgctgagagttgaactgtcagttttctctaaagtgtagccattgataactcaagacatac 385
Query: 186 atctgagaatatgtggacagtacgagttgatattgatgtggataatggacacaatagtgt 245
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atccgagaatatgtggacagtacgagttgatattgatgtggataatggacacaatagtgt 445
Query: 246 gtggggaagaaaggggggg-atctggggagagtt 278
||||||||||||||||||| ||||||||||||||
Sbjct: 446 gtggggaagaaaggggggggatctggggagagtt 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 690
Length adjustment: 9
Effective length of query: 280
Effective length of database: 681
Effective search space: 190680
Effective search space used: 190680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no329_g23.g1 MSMg01no329_g23.g1 CHROMAT_FILE:
MSMg01no329_g23.g1 PHD_FILE: MSMg01no329_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:53 2005
(346 letters)
>mm_chr11_58608724_58609469
Length = 746
Score = 646 bits (334), Expect = 0.0
Identities = 343/346 (99%)
Strand = Plus / Minus
Query: 1 ttcaggaaatgggagaaagatgtccccagggccttagaacttacacaatgaaggctgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ttcaggaaatgggagaaagatgtccccagggccttagaacttacacaatgaaggctgaat 487
Query: 61 ttaaaatggagagaaggggatgactagagttctggagaggcaaagaccactcagagcaaa 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 486 ttaaaatggagagaaggggatgactagagttctggagaagcaaagaccactcagagcaaa 427
Query: 121 aaggcaaggggtgggagaggaaatttattgaatgagggaagggtatgaaagaagatatta 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 426 aaggcaaggggtgggagaggaaacttattgaatgagggaagggtatgaaagaagacatta 367
Query: 181 ttaatgacgttactgaaaatggaccaaagaatcagcttttgaggggctgtttaaaaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttaatgacgttactgaaaatggaccaaagaatcagcttttgaggggctgtttaaaaaaat 307
Query: 241 gcagggaaggctgtatttagatgggcaaatgttgctgtggttctagtccaagactgggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gcagggaaggctgtatttagatgggcaaatgttgctgtggttctagtccaagactgggat 247
Query: 301 ttgcagtggacagaagtgggcgggactgtgaagacagtggacaggt 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ttgcagtggacagaagtgggcgggactgtgaagacagtggacaggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
