Query= MSMg01no330_a08.b1 MSMg01no330_a08.b1 CHROMAT_FILE:
MSMg01no330_a08.b1 PHD_FILE: MSMg01no330_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:40 2005
(321 letters)
>mm_chr11_116185752_116186471
Length = 720
Score = 505 bits (261), Expect = e-147
Identities = 303/317 (95%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgtggttgttgctcactacaaccagaggtactgtgttcaagggtgtcaaggaa 63
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaattctgtggttgggggtcactacaaccagaggtactgtgttcaagggtgtcaaggaa 460
Query: 64 ggctaagaaccgttgctccggcgggtggggccgtccctagccagatgctccgggagtgtg 123
|| |||||||| |||| ||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 459 ggttaagaaccactgctgtggcgggtggggccttccctagccaggtgctccgggagtgtg 400
Query: 124 taagaaagctggctggctgactgcatgggtgtgcgtgctatgcttgtgtagcttgttgct 183
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 taagaaagct-gcaggctgactgcatgggtgtgcgtgctatgcttgtgtagcttgttgct 341
Query: 184 tgtgaaactcctaacagtgagagcacctttgcctgctttggggacccttttctccaactg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgtgaaactcctaacagtgagagcacctttgcctgctttggggacccttttctccaactg 281
Query: 244 ggtcgcctcatccagccttgacactgggaaggcatcctgagaaccaagactgtggcccca 303
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 280 ggtcgcctcatccagccttgacactgggtaggcaccctgagaaccaagactgtggcccca 221
Query: 304 gcagaagaggaacatct 320
|||||||||||||||||
Sbjct: 220 gcagaagaggaacatct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 720
Length adjustment: 9
Effective length of query: 312
Effective length of database: 711
Effective search space: 221832
Effective search space used: 221832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_a08.g1 MSMg01no330_a08.g1 CHROMAT_FILE:
MSMg01no330_a08.g1 PHD_FILE: MSMg01no330_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:40 2005
(283 letters)
>mm_chr11_116027628_116028310
Length = 683
Score = 509 bits (263), Expect = e-148
Identities = 278/283 (98%)
Strand = Plus / Plus
Query: 1 ctgaattgaatgccattcagtgagtaaaggtgctattgccagcaggcctgcctatctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaattgaatgccattcagtgagtaaaggtgctattgccagcaggcctgcctatctgag 260
Query: 61 ttggatagcccaggacacgcattacggaggtagagaattgactcctgcaagtcttccttt 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggatagcccaggacacgcattatggaggtagagaattgactcctgcaagtcttccttt 320
Query: 121 tacctccatgtgcgtgtgtgctctactacgccagatgaataagtaaagttcagaaagaat 180
||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct: 321 tacctccatgtgcgtgtgtgctccactacgccagatgagtaagtaaagttcaaaaagaat 380
Query: 181 tcctgaggtgggtatgatcatacacacttagcggcaaccctagaacttggcaggaaaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctgaggtgggtatgatcatacacacttagcggcaaccctagaacttggcaggaaaatc 440
Query: 241 acaagttctaggtcaacctgaggtatgtaatagaaaaagcagt 283
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 acaagttctaggccaacctgaggtatgtaatagaaaaagcagt 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
