CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAACCA
AAAAAAAAAAAAAAAAAGATTTATTTATCTTATTTATATGGGTACATTGT
AGCAGTCTTTAGACACACCAGAAGAGGGCATCAGATCCCATTACAGATGG
TTGTTAGCCACCATGTGGTTGCTGGGAATTGAACACAGGACCTCTGGAAG
AACAGTGCTCTTAACCGCTGAGCCATTTCTTCAGCCCCCTTAAAAATATT
TTAATTGATCTTGGGCAGGCCAAGAAAAAGAAGAATCATGATGGCATGGA
ACATGATTTTAAATGACTAACAGGATTACCTGACTAAAGAATATCAGTGG
ATAGTTCTTCCAATGGAACAGGGTATTAAATGAATGAAAGGATCACCTGA
GTGAAGATTAGCAGGGGATAGCTCATCCAGTGAAGAAGAGCTGGATTTCC
CAGATTTCTGAGTAGGAACCTCTAGTAGTGTGTTGTTTTTATTCCCTAAT
GGTTTCTAAGATTGAGAAATTGCTTTCAGTATCATCATTAAACAGCTTCT
ACCCCATTCATTAGGCTGATTACTCAATCAAATTAAGTTAACAGCTTCTT
TATTCTCTCTTAAATGAGGTGATGTGTGAACACAAGACTTCCTGGTCACA
ACACATGTTTTTATGAAAGAAAACAAAGAAAAAAAAACCCTTGGAATTGT
TAT

TTTTTTTTTTTTTTTTTTTTNCCCCCCATCGGGAGTGAGTGTTATACGAG
AAAATGAGTAGTCTGGTGGAAGTCTGGTCGTCCAATTCAGGCGAACTATA
GAAGGATTGCGCAATAATGATGCTCCTGTTTCTACCTCCCAAGTGCTGGG
GTTACTGGGAATCTTTCACCTGACTGGATGCTAAATTTGAGACATCTAGC
TTTGGCTGTGTGTGTGTGTGTGAAAAAGTGTGCGTGAGGGAGGAAGTAGT
GAAATATTTTTTGTGTTTATTATAAAAAATAATAATTGTTTCATATTTTT
TTTAAATATTTAAGAAAAAAAAATTTGATATTATATATGAAAAATTTTAA
TAAAAAAAAAATAATTTTTTTTATAAAGAAATGAGGAGGAGTGTAGAGAG
AGGAAATTTTAGGTGGTTTCCCAGAACGAGACCCCCTGATTAAGGTTGTG
ATAGTGATGTAGTGTTGGCCCCCCCTTATATAAAAAAAAAAAAAAATAAT
CGGGGTCTCTGTTGGGGTGACTTATCATTATATTATGATTAAGTGTGCAA
TTAGGTTGGTTAGGTTGATGTGTATATATCGATTATTGATGTTTAAAGTT
TATTATATATTGTTAGTTTTATATTATGTACTATTAATAATATTTTGTTT
TTAGTGCTTCTATTTATATGAGTAAAATAGCTGAGTTTCGAATTGATATT
ATTGTAAGATAATTAAGTGAAAGAGAAAAGTGTTGGTAGTTGGGATTACA
ATCAGTGATTTGAGCGGTTATGGAATAAATTAATGATTTTTTGTATTATG
TAGTGATTTTCAAGATATCTTTGAAGTGTGATAGTGATATAATAATAGTT
ATGTGCGCTTTAAATTAGTAAAGAGGTAGTGTGTTTGGTGTGTCGTTGGA
TCTGTGCACTTTGTAAA

Query= MSMg01no330_a19.b1 MSMg01no330_a19.b1 CHROMAT_FILE:
MSMg01no330_a19.b1 PHD_FILE: MSMg01no330_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:42 2005
         (616 letters)



>mm_chr11_57152549_57153564
          Length = 1016

 Score = 1093 bits (565), Expect = 0.0
 Identities = 571/573 (99%), Gaps = 1/573 (0%)
 Strand = Plus / Minus

                                                                        
Query: 44   ctcaaaaaaaccaaaaaaaaaaaaaaaaaagatttatttatcttatttatatgggtacat 103
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 ctcaaaaaaacc-aaaaaaaaaaaaaaaaagatttatttatcttatttatatgggtacat 958

                                                                        
Query: 104  tgtagcagtctttagacacaccagaagagggcatcagatcccattacagatggttgttag 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957  tgtagcagtctttagacacaccagaagagggcatcagatcccattacagatggttgttag 898

                                                                        
Query: 164  ccaccatgtggttgctgggaattgaacacaggacctctggaagaacagtgctcttaaccg 223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  ccaccatgtggttgctgggaattgaacacaggacctctggaagaacagtgctcttaaccg 838

                                                                        
Query: 224  ctgagccatttcttcagcccccttaaaaatattttaattgatcttgggcaggccaagaaa 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837  ctgagccatttcttcagcccccttaaaaatattttaattgatcttgggcaggccaagaaa 778

                                                                        
Query: 284  aagaagaatcatgatggcatggaacatgattttaaatgactaacaggattacctgactaa 343
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777  aagaagaatcattatggcatggaacatgattttaaatgactaacaggattacctgactaa 718

                                                                        
Query: 344  agaatatcagtggatagttcttccaatggaacagggtattaaatgaatgaaaggatcacc 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  agaatatcagtggatagttcttccaatggaacagggtattaaatgaatgaaaggatcacc 658

                                                                        
Query: 404  tgagtgaagattagcaggggatagctcatccagtgaagaagagctggatttcccagattt 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657  tgagtgaagattagcaggggatagctcatccagtgaagaagagctggatttcccagattt 598

                                                                        
Query: 464  ctgagtaggaacctctagtagtgtgttgtttttattccctaatggtttctaagattgaga 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  ctgagtaggaacctctagtagtgtgttgtttttattccctaatggtttctaagattgaga 538

                                                                        
Query: 524  aattgctttcagtatcatcattaaacagcttctaccccattcattaggctgattactcaa 583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537  aattgctttcagtatcatcattaaacagcttctaccccattcattaggctgattactcaa 478

                                             
Query: 584  tcaaattaagttaacagcttctttattctctct 616
            |||||||||||||||||||||||||||||||||
Sbjct: 477  tcaaattaagttaacagcttctttattctctct 445


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)