Query= MSMg01no330_f24.b1 MSMg01no330_f24.b1 CHROMAT_FILE:
MSMg01no330_f24.b1 PHD_FILE: MSMg01no330_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:04 2005
(231 letters)
>mm_chr11_93242671_93243301
Length = 631
Score = 435 bits (225), Expect = e-126
Identities = 228/229 (99%)
Strand = Plus / Plus
Query: 1 aggtgctaacaactgtaagatacatcccaatttcagagattctgtaatatgaaattttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtgctaacaactgtaagatacatcccaatttcagagattctgtaatatgaaattttaa 260
Query: 61 aaactgcattttggaatggtaaaaaaatacattatgattctattccaagtgttgaaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaactgcattttggaatggtaaaaaaatacattatgattctattccaagtgttgaaattc 320
Query: 121 attctattccatgatgttgaaaaaagacagaaattctacttaagggtatgctgtggcgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attctattccatgatgttgaaaaaagacagaaattctacttaagggtatgctgtggcgat 380
Query: 181 aagaacaacagacttgattgctatgcatatctctaaatatttacaagtc 229
||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 aagaacaacagacttgagtgctatgcatatctctaaatatttacaagtc 429
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no330_f24.g1 MSMg01no330_f24.g1 CHROMAT_FILE:
MSMg01no330_f24.g1 PHD_FILE: MSMg01no330_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:04 2005
(199 letters)
>mm_chr11_93408494_93409096
Length = 603
Score = 356 bits (184), Expect = e-103
Identities = 196/202 (97%), Gaps = 4/202 (1%)
Strand = Plus / Minus
Query: 1 tctccaagttgtttttggtcagagtgttttaccatggcagttgaaaccaaactgatagag 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 411 tctccaagttgtttttggtcagagtgttttaccatggcagttgaaaacaaactgatagag 352
Query: 61 tgggtctcaaagttttctacattttagaatcacctggatgttaaaaag----aaaaaaaa 116
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 351 tgggtctcaaagttttctacattttagaatcacctggatgttaaaaagaaaaaaaaaaaa 292
Query: 117 agaccccagtgttcataccctaggtcaattgagttgggcatgctgtgtgtgtgtgtgtgt 176
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 291 agaccccagtgttcataccctaggtcaattaagttgggcatgctgtgtgtgtgtgtgtgt 232
Query: 177 gtgtgtgtgtgtgtgtgtgtgt 198
||||||||||||||||||||||
Sbjct: 231 gtgtgtgtgtgtgtgtgtgtgt 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 603
Length adjustment: 8
Effective length of query: 191
Effective length of database: 595
Effective search space: 113645
Effective search space used: 113645
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
