TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAAATACGCGG
AATTCTCCACTGGTTGACTTTCTAGGAACACAGAAGAATTATTAAAGCCA
CCAATAGTCCTAGGTAGCTCTTTGCCACCTGTCTTTCCCATTCATCTAAG
TGTCTTGGTCTTCTTTGACTTGACTAAATGCTCACCGGTGTCACAACCCT
GTTGTAAGCAGTGATACTCTCTTCCCTCTTAAAGATTAGAAATGGAAAAA
TTCCAAGTCTTTCAAATAATATTGAATGAAACTCAGGTTGAATACATTTC
TTTTCCAAACATGTCTTGACTTCAGAATTTTATTGTCAGTGCATTGATAA
GTAATTTATATGTAGGGTTTTGTTCTAGACCTAAGAAGACCATGTGTCTT
TCCATAGCTCCTTCCCTTTCCTAGTATATTCTTCCCTCCCATTCTCTAAG
CACGGCCTTGGATAGTCTCCTTTTGGACATTTCCCCCAATCTACAGACAG
AAACAGGGTGGTTTTTGTTTTTAGGACAGCTTTTGTCATACAGTTTCCAA
TGAATAGTTACCTAAAAGGAAAATATGGCTTTTGTCTGTGTATTTCAGAT
ACAGACACAAGATTAACAGTTCAATCCAAAGGAGTCTGCATTGAATGGAG
TTCAACAAACATACTATCCAAGGACAGGCCAAAGCAGGACTCTCGTCTTA
CAGATCTGTGCTGTGGGACCTCATGAAGTGTAGCAGAAGCTGGTGAGAAA
GGAGGCCTA

GCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAATAGACCCATAATCACCACTGCA
AAAACTCAAGTTCAAGTAAATCAAGGACCTCAACATAAAACCAGATACAC
TAAATCTAATAGAATAAAAAGTGGAGAATAGCCTTAAATACATTGTTACA
GAAGACAACTCCTTGAACAGAACACCAATGGCTCAGCCTCTAAGATTAGT
GATTGACAAATGGATCCTCTTGAAACTGAAAAGCATCTGTAAGGCAAAGG
ACACTGTCACTAGGACAAAATGGCAGCCTACAGATTTGGAAAAGATCTTC
ACCAACTCTACATCCAACAGAGGGCTAATATCCAAAATATAGAAAGAATT
CAAGAAACTAGACATCAACAAACCAAATAACCCAATTAAAAAATGGTATA
CAGAGCTAAACAGAGACTCCTCAACAGCGAAATCTCTAATGGCCAACAAA
CAAAGAAATGTTCAAAGTCCTTAGTCATCAGGGAAATGCAAATCAAACTA
CTCTGAGATTCCACCTTACACCTATCAGAATGGCTAAGACCAAGCAACAG
CAGATGCTGGCAAGGGTGTGGAGCAAGGAGAACACTCCTCCATTGCTGGT
GGGAGAACAAACTTGTACAACCACTCTGGAAATCACCTGGTGGTTTCTCA
GAAAATTGGGAATAGTTCTACCTCAAGACCCACCTATACCACTCCTGGAC
ATATG

Query= MSMg01no334_a07.b1 MSMg01no334_a07.b1 CHROMAT_FILE:
MSMg01no334_a07.b1 PHD_FILE: MSMg01no334_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:19 2005
         (598 letters)



>mm_chr11_8018754_8019752
          Length = 999

 Score =  967 bits (500), Expect = 0.0
 Identities = 574/610 (94%), Gaps = 20/610 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacagaagaattattaaagccaccaatagtcctaggtagctctttgccacctgtctttcc 60
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cacagaagaattattaaagcctccaatagtcctaggtagctctttgccacctgtctttcc 249

                                                                       
Query: 61  cattcatctaagtgtcttggtcttctttgacttgactaaatgctcaccggtgtcacaacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 250 cattcatctaagtgtcttggtcttctttgacttgactaaatgctcaccggtgtcataacc 309

                                                                       
Query: 121 ctgttgtaagcagtgatactctcttccctcttaaagattagaaatggaaaaattccaagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctgttgtaagcagtgatactctcttccctcttaaagattagaaatggaaaaattccaagt 369

                                                                       
Query: 181 ctttcaaataatattgaatgaaactcaggttgaatacatttcttttccaaacatgtcttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctttcaaataatattgaatgaaactcaggttgaatacatttcttttccaaacatgtcttg 429

                                                                       
Query: 241 acttcagaattttattgtcagtgcattgataagtaatttatatgtagggttttgttctag 300
           ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 430 acttcagaattttattgtcagtgcattgataaggaatttatatgtagagttttgttctag 489

                                                                       
Query: 301 acctaagaagaccatgtgtctttccatagctccttccctttcctagtatattcttccctc 360
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 490 gcctaagaagaccatgtgtctttccatagctccttccctttcctagaatattcttccctc 549

                                                                       
Query: 361 ccattctctaagcacggccttggatagtct-----------ccttttggacatttccccc 409
           ||||||||| ||||||||||||||||||||           |||||||||||||||||||
Sbjct: 550 ccattctctgagcacggccttggatagtctgatttttacctccttttggacatttccccc 609

                                                                       
Query: 410 aatctacagacagaaaca-gggtggtttttgtttttaggacagcttttgtcatacagttt 468
           |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 610 aatctacagacagaaacaagggtgctttttgtttttagaacagcttttgtcatacagttt 669

                                                                       
Query: 469 ccaatgaatagttacctaaaaggaaaatatggcttttgtctgtgtatttcagatacagac 528
           ||||||||||||||||||||||||  ||||| |||||| |||||||||||||||||||||
Sbjct: 670 ccaatgaatagttacctaaaaggagtatatgacttttgcctgtgtatttcagatacagac 729

                                                                       
Query: 529 acaagattaacagttcaatccaaaggagtctgcattgaatggagttcaacaaacatacta 588
           |||||||        ||||||||||||||||||| |||||||||||||||||||| || |
Sbjct: 730 acaagat--------caatccaaaggagtctgcaatgaatggagttcaacaaacacacaa 781

                     
Query: 589 tccaaggaca 598
           ||||||||||
Sbjct: 782 tccaaggaca 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 999
Length adjustment: 10
Effective length of query: 588
Effective length of database: 989
Effective search space:   581532
Effective search space used:   581532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)