Query= MSMg01no337_e11.b1 MSMg01no337_e11.b1 CHROMAT_FILE:
MSMg01no337_e11.b1 PHD_FILE: MSMg01no337_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:37 2005
(629 letters)
>mm_chr11_34690649_34691671
Length = 1023
Score = 1071 bits (554), Expect = 0.0
Identities = 606/628 (96%), Gaps = 11/628 (1%)
Strand = Plus / Plus
Query: 5 gaattcttcctttgc--ctgtgaggcagagcagccccgaggacaggctctcccagttgga 62
|||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattcttcc--tgcgagtgtgaggcagagcagccctgaggacaggctctcccagttgga 262
Query: 63 gagagggagtgagttgcagtggatttgagtaagaaggagccagtggaacagaggctctcc 122
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 263 aagagggagtgagttgcagtggatttgggtaagaaggagccagtggaacagaggctctc- 321
Query: 123 tgaaaacatcctcttctgtctgttgtcaccaagtctgccatgacacatggtaagtaagcc 182
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 -----acattctcttctgtctgttgtcaccaagtctgccatgacacatggtaagtaagcc 376
Query: 183 atgaagaccttgcaagtgctggaggattccctgggtttatttcttctttggtgctctctg 242
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 atgaagacctttcaagtgctggaggattccctgggtttatttcttctttggtgctctctg 436
Query: 243 ttttggtagaagaatgctcaaagtttagtaatctatacacacaggcccgctgcctgtgga 302
||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 437 ttttggtagaagaatgctcaaagtttagtaaacaaaacacacaggcccgctgcctgtgga 496
Query: 303 tggtaaactagagaaagagtgagaagtggaaattc-tttttttttttcatttttttaaaa 361
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 497 tggtaaactagagaaagagtgagaagtggaaattcttttttttttttcattttttaaaaa 556
Query: 362 tattttttattacatattttcctcaattacatttccaatgctatcccaaaagtcccccat 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tattttttattacatattttcctcaattacatttccaatgctatcccaaaagtcccccat 616
Query: 422 accctcccccccttccctacccacccattctcatttttttggccctggcgttcccctgta 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 accctcccccccttccctacccacccattctcatttttttggccctggcgttcccctgta 676
Query: 482 ctggggcatatacattttgcgtgtccaatgggcctctctttccagtgatggccgactagg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctggggcatatacattttgcgtgtccaatgggcctctctttccagtgatggccgactagg 736
Query: 542 ccatcttttgatacatatgcagctagagtcaagagctccggggtactggttagttcataa 601
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tcatcttttgatacatatgcagctagagtcaagagctccggggtactggttagttcataa 796
Query: 602 tgttgttccacctatagggttgcagatc 629
||||||||||||||||||||||||||||
Sbjct: 797 tgttgttccacctatagggttgcagatc 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1023
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1013
Effective search space: 627047
Effective search space used: 627047
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_e11.g1 MSMg01no337_e11.g1 CHROMAT_FILE:
MSMg01no337_e11.g1 PHD_FILE: MSMg01no337_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:37 2005
(573 letters)
>mm_chr11_34839345_34840319
Length = 975
Score = 1040 bits (538), Expect = 0.0
Identities = 557/564 (98%), Gaps = 2/564 (0%)
Strand = Plus / Minus
Query: 1 tggattaattgaaagacataaattcaaagagatggcataaagaaggaaaatgaggtgggc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 564 tggattaattgaaagacataaattcaaagagatggcataaggaaggaaaatgaggtgggc 505
Query: 61 atgcttgctcaactgggcaccaagatttattgaaaagttacagcagaccaaggacattta 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atgcttgctcaactggtcaccaagatttattgaaaagttacagcagaccaaggacattta 445
Query: 121 cacaatgtaggaacactggtatacatgaatagtgttggtaaagaacatcacagggagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cacaatgtaggaacactggtatacatgaatagtgttggtaaagaacatcacagggagaat 385
Query: 181 taggtatatgcatcaggaaactgttagcattctc--ttaacaccataaacagtaacaaca 238
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 384 taggtatatgcatcaggaaactgttagctttctcttttaacaccataaacagtaacaaca 325
Query: 239 acaaattaatatcaggcagatgatatatctccaaagtaaaagcaagtgatatcattttca 298
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 324 acaaattaatatcaggcagatgatatatctccaaaataaaagcaagtgatatcattttca 265
Query: 299 gatatactattggagattgtgactttggttcaagacaaactgtaaagctacataagagac 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gatatactattggagattgtgactttggttcaagacaaactgtaaagctacataagagac 205
Query: 359 acttggttggtgaacttgaccacattgaaagcaccagctttactggagatggggaggctc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 acttggttggtgaacttgaccacattgaaagcaccagctttactggagatggggaggctc 145
Query: 419 ccaggagtctatgggggtgactttagctgagactcctagcaatggggatatggaatctga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ccaggagtctatgggggtgactttagctgagactcctagcaatggggatatggaatctga 85
Query: 479 agtggccacctcctgtagcctggagtatccctagtggagggagaaggtcaccaactcacc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 agtggccacctcctgtagcctggagtatccctagtggagggagaaggtcaccaactcacc 25
Query: 539 cataatacttcacaatccaaagat 562
||||| ||||||||||||||||||
Sbjct: 24 cataacacttcacaatccaaagat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 975
Length adjustment: 10
Effective length of query: 563
Effective length of database: 965
Effective search space: 543295
Effective search space used: 543295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
