AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCACTCTTATCCTGCATAAATGAGCACATGAACAGAGGGGAAACAAACAA
GAAAGTATTCAGCAAGCTAAGAAAGCATGGTGTAGGTTTAGACAAAGTAT
GGTGCAATTTTAACTTGGGCAGTCAGGTTGAAGTGGACGTTCTAAAATCT
CTCAGTTTTCCAGACTGACCACTCCCTTCTCATCTCCAACACTCCAACCA
AAGCAAAATTTAGTTCCTCCTGTCCTTAGCTACTTCACCTCAAATGTCTG
TAGCCATGCTGCATACAAGCTATGTCTTACAAAATTTTATAAGTCACCAA
CCAAAAAAGTCAATGGGAAACACTGCTAATACGTGTACGACCTCACCTCC
CTGGTTTCATATCCATGATATTATGTAATTTTTCACAGTACTTATAGACA
TGGGCCTAAATAAACAGGGTCTAATCCAAGTACTAAACTATTTCTACTAC
AGGTTTCTTGTTGATTTTTTTCATGTTAACCTTACTTAGAAGTTAGAAGA
CTTTAATAGCTAATCTATGAGAGTCTATTATTCCACTTAAACAAAGATCC
ACTTTCCAAATATATGGAGAGCTCTGCTGGCTGTTGTCACCCTAATGTCT
AGAGACTCAAGCATCATTGTTTAGNTTTTTTGGTTGTTTGGTATGTTTTT
TTTTTTCCGAAACAGGGTTTCTCTGTGAAGCCCTGGCTGTCCTGGAAC

CAATGGGAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCCGATTTGATTCAATAATTTTAGGAAGTTTTA
AGAGATGGTCTTAGTTGCTTTGCTAGAAAGTGTAATAAGGTTACAGTCAA
GAATAAATGTGCCCNCTCCTCAATANNNTAAAAAAAAGCTGCATAATAAN
AAATACAATGAACTTTTATTATTTATTCTAAAAGAAAAATAATTTGGACA
ATTTGGGTCAGGAAAAACTTTAGGCCAGGAACNCCCCAATTAACTTTTAA
ACCCGGCCCTGTAAACTTTAATTGGCCCCNNNNAAAGCCCTGAAAACTTT
CTTTGTTTCGGTTAATTGGAAAAAAAAATTGGGGTGGGGCCCCCCCCTTT
TTTTTTTTTTTATTCTTGTGGTGGCCCCCCCCAAAAAAAAATCTNNNNNN
NNTTTTCCTCTTCCCCTATATAAAAATTNNNNNNNNCTCCCCCTNCCATA
TTTTCTTTTATTTTTTNTNNNNNCCCTGACCTTTTCTTTNNNNNNTCATT
CTTTTCTCCCCCCCCTCTCCTTCNCTTTCTCCCGGTTGTGGGGGGGGGGG
AGCTTTTAGTNTTNTNNTAGTTCCTTCTTTTTTTTTTAGTTTTNTTTTTN
CNNNNNNNNNNTNNNTTTTTTTTTGTATTGTGTTACTTTNNAAGTTCNC

Query= MSMg01no338_d11.b1 MSMg01no338_d11.b1 CHROMAT_FILE:
MSMg01no338_d11.b1 PHD_FILE: MSMg01no338_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:48 2005
         (630 letters)



>mm_chr11_46337968_46338997
          Length = 1030

 Score = 1149 bits (594), Expect = 0.0
 Identities = 618/626 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcactcttatcctgcataaatgagcacatgaacagaggggaaacaaacaagaaagt 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gaattcactcttaccctgcataaatgagcacatgaacagaggggaaacaaacaagaaagt 771

                                                                       
Query: 65  attcagcaagctaagaaagcatggtgtaggtttagacaaagtatggtgcaattttaactt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 attcagcaagctaagaaagcatggtgtaggtttagacaaagtatggtgcaattttaactt 711

                                                                       
Query: 125 gggcagtcaggttgaagtggacgttctaaaatctctcagttttccagactgaccactccc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 gggcagtcaggttgaagtggacgttctaaaatctctcagttttccagactgaccactccc 651

                                                                       
Query: 185 ttctcatctccaacactccaaccaaagcaaaatttagttcctcctgtccttagctacttc 244
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 650 ttctcatctccaacactccaaccaaagcaaaatttagctcctcctgtccttagctacttc 591

                                                                       
Query: 245 acctcaaatgtctgtagccatgctgcatacaagctatgtcttacaaaattttataagtca 304
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 590 acctcaaatgtctgtagccacgctgcatacaagctatgtcttacaaaattttataagtca 531

                                                                       
Query: 305 ccaaccaaaaaagtcaatgggaaacactgctaatacgtgtacgacctcacctccctggtt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 530 ccaaccaaaaaagtcaatgggaaacactgctaatacgtgtacgacctcacctccctggtc 471

                                                                       
Query: 365 tcatatccatgatattatgtaatttttcacagtacttatagacatgggcctaaataaaca 424
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 470 tcatatccatgatattatgtaatatttcacagtacttatagacatgggcctaaataaaca 411

                                                                       
Query: 425 gggtctaatccaagtactaaactatttctactacaggtttcttgttgatttttttcatgt 484
           ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 410 gggcctaatccaagtactaaactatatctactacaggtttcttgttgatttttttcatgt 351

                                                                       
Query: 485 taaccttacttagaagttagaagactttaatagctaatctatgagagtctattattccac 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 taaccttacttagaagttagaagactttaatagctaatctatgagagtctattattccac 291

                                                                       
Query: 545 ttaaacaaagatccactttccaaatatatggagagctctgctggctgttgtcaccctaat 604
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ttaaacaaagatccactttgcaaatatatggagagctctgctggctgttgtcaccctaat 231

                                     
Query: 605 gtctagagactcaagcatcattgttt 630
           ||||||||||||||||||||||||||
Sbjct: 230 gtctagagactcaagcatcattgttt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space:   632400
Effective search space used:   632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)