Query= MSMg01no339_c04.b1 MSMg01no339_c04.b1 CHROMAT_FILE:
MSMg01no339_c04.b1 PHD_FILE: MSMg01no339_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:54 2005
(596 letters)
>mm_chr11_94338476_94339471
Length = 996
Score = 1118 bits (578), Expect = 0.0
Identities = 587/590 (99%)
Strand = Plus / Plus
Query: 7 gaattccttcctctgccactatttacaagatgccactgccctgttcctgcctgatagcag 66
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattccttcctctgaaactatttacaagatgccactgccctgttcctgcctgatagcag 266
Query: 67 aggggaaaggagagacgcaaaaggcagggaagtggaggaaaacaccagatgcacactcct 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aggggaaaggagagacgcaaaaggcagggaagtggaggaaaacaccagatgcacactcct 326
Query: 127 tcatagccatgcctccacctcctggcaagaaacagcctcagtgatctttgttgtcattct 186
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 327 tcatagccatgcctccacctcctggcaagaaacagtctcagtgatctttgttgtcattct 386
Query: 187 gaagaccctagggagaaactggtatgctcaggggtgtcaggctaaactcctaccaactct 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gaagaccctagggagaaactggtatgctcaggggtgtcaggctaaactcctaccaactct 446
Query: 247 gtccctccaacagccatccctagaaggctaaaggttcctgctttaccatctcattcatga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gtccctccaacagccatccctagaaggctaaaggttcctgctttaccatctcattcatga 506
Query: 307 gggtcggtgggaccacagaggcaagagggctacacgaactgcccagactgttccaaatcc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gggtcggtgggaccacagaggcaagagggctacacgaactgcccagactgttccaaatcc 566
Query: 367 agtgttagggttgccaaaaaggccacctgtgtctcaccatgccgtactttcccttcctgc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 agtgttagggttgccaaaaaggccacctgtgtctcaccatgccgtactttcccttcctgc 626
Query: 427 tgccctcaagccaggctccacgtgtccagtctttgacttgctggcaaggctgagtgggct 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgccctcaagccaggctccacgtgtccagtctttgacttgctggcaaggctgagtgggct 686
Query: 487 ccagtaagaaagaggccagctgacctcattggccagagtgctaatcccctccagatgggc 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ccagtaagaaagaggccagctgacctcattggccagagtgctaatcccctccagatgggc 746
Query: 547 tggtggcttgcaccaagggcccgctgcccagactgagacaactctggtcc 596
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tggtggcttgcaccaagggcccgctgcccagactgagacaactctggtcc 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_c04.g1 MSMg01no339_c04.g1 CHROMAT_FILE:
MSMg01no339_c04.g1 PHD_FILE: MSMg01no339_c04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:55 2005
(499 letters)
>mm_chr11_94479958_94480857
Length = 900
Score = 758 bits (392), Expect = 0.0
Identities = 419/428 (97%), Gaps = 3/428 (0%)
Strand = Plus / Minus
Query: 1 acttctgcaacctctaggatggctcaccaagtgtgttactgatggtctcttctgtttgtg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 acttctgcaacctccaggatggctcaccaagtgtgttactgatggtctcttctgtttgtg 368
Query: 61 gattcttgacatcttattcaaagacccctcaaaaaaagcacac-c-aatagcaaagcagc 118
|||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||
Sbjct: 367 gattcttgacatcttattcaaagacccc-aaaaaaaagcacacacaaatagcaaagcagc 309
Query: 119 aaggattcttttgtgggttcatgaataggacaagttggttggcttaggggcagaattcag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aaggattcttttgtgggttcatgaataggacaagttggttggcttaggggcagaattcag 249
Query: 179 gtggttttctgtgttgatagataggttatggtcgcttttgttatgtcctgtggtggtttg 238
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 248 gtggttttctatgttgatagataggttatggtagcttttgttatgtcctgtggtggtttg 189
Query: 239 aatgggtatggcccccacaggcttatgtgtttgaatgcttggcccatagggtctggcacc 298
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 aatgggtatggcccctacaggcttatgtgtttgaatgcttggcccatagggtctggcacc 129
Query: 299 attagaaggtgtggagccttgttggaagaagtgtgtcattgtagagacagtctttgaaat 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 128 attagaaggtgtggagccttgttggaagaagtgtgtcattgtagagacagtctttgaagt 69
Query: 359 ctcttaaactcaagctatgcccagtgtggcacacagtctccttctgctgcctgcagatca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ctcttaaactcaagctatgcccagtgtggcacacagtctccttctgctgcctgcagatca 9
Query: 419 cgacatag 426
||||||||
Sbjct: 8 cgacatag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 900
Length adjustment: 10
Effective length of query: 489
Effective length of database: 890
Effective search space: 435210
Effective search space used: 435210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
