Query= MSMg01no339_g06.b1 MSMg01no339_g06.b1 CHROMAT_FILE:
MSMg01no339_g06.b1 PHD_FILE: MSMg01no339_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:12 2005
(602 letters)
>mm_chr11_92084995_92085995
Length = 1001
Score = 1143 bits (591), Expect = 0.0
Identities = 597/599 (99%), Gaps = 1/599 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcccttttcattccctgacacacctgttcttttctgtctgcaactttcacatc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcccttttcattccctgacacacctgttcttttctgtctgcaactttcacatc 263
Query: 64 actctcttgttcttgttctcagaactggagatcagctctgtaaataaatccacaaaggga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 actctcttgttcttgttctcagaactggagatcagctctgtaaataaatccacaaaggga 323
Query: 124 tttagaatataatcatcctctttgttacattttgccaacaaatacttatttttttttagc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 tttagaatataatcatcctctttgttacattttgccaacaaatacttatttttttt-agc 382
Query: 184 tagttaaactccatggaaatcattttacataaattaaccttctctttgtacatcttgaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tagttaaactccatggaaatcattttacataaattaaccttctctttgtacatcttgaat 442
Query: 244 tgttcttactttgatggtgaagaaagtgaatcacatagtaggttaatgaattccctctgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgttcttactttgatggtgaagaaagtgaatcacatagtaggttaatgaattccctctgc 502
Query: 304 ctgtggagttattaaatggaggattgaagtttgagttcagatgcctgacgttttaacccc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctgtggagttattaaatggaggattgaagtttgagttcagatgcctgacgttttaacccc 562
Query: 364 tacattgcttttacattctcagtgcttccacagtgttttcaaggatataactggtttggt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tacattgcttttacattctcagtgcttccacagtgttttcaaggatataactggtttggt 622
Query: 424 ttggttttgagatgtagctatgctatgcaggtcaatctggctttgaactcatgagtcttc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttggttttgagatgtagctatgctatgcaggtcaatctggctttgaactcatgagtcttc 682
Query: 484 atccttcaaccaccagattgccagtattgtagacaggcaccagcacacctggcaagtttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 atccttcaaccaccagattgccagtattgtagacaggcaccagcacacctggcaagtttt 742
Query: 544 aggatggatctggaagcttattctgctatttttcaaacctttcttgttgatgattattt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gggatggatctggaagcttattctgctatttttcaaacctttcttgttgatgattattt 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1001
Length adjustment: 10
Effective length of query: 592
Effective length of database: 991
Effective search space: 586672
Effective search space used: 586672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_g06.g1 MSMg01no339_g06.g1 CHROMAT_FILE:
MSMg01no339_g06.g1 PHD_FILE: MSMg01no339_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:12 2005
(535 letters)
>mm_chr11_92248908_92249842
Length = 935
Score = 596 bits (308), Expect = e-174
Identities = 311/312 (99%), Gaps = 1/312 (0%)
Strand = Plus / Minus
Query: 225 acaaacaagaggaaagagaatgagaagtgggcctgggctataagcctcaaggactgctca 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 acaaacaagaggaaagagaatgagaagtgggcctgggctataagcctcaaggactgctca 876
Query: 285 cttgtaaccactttctctagctacagcctacaacccaaatattctataa-cccacctccc 343
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 875 cttgtaaccactttctctagctacagcctacaacccaaatattctataaccccacctccc 816
Query: 344 cacaaacaaagtcactgtctggtgactaagtctctaagtacatgagcctttgaagtgcat 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 cacaaacaaagtcactgtctggtgactaagtctctaagtacatgagcctttgaagtgcat 756
Query: 404 ttcctgtctagatcataacattgattataaactccatttctgtattctgtgctaactgca 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ttcctgtctagatcataacattgattataaactccatttctgtattctgtgctaactgca 696
Query: 464 cttatataatcagctgtgctcaggccagccaagttatttacctctcataatgactttatg 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 cttatataatcagctgtgctcaggccagccaagttatttacctctcataatgactttatg 636
Query: 524 acaaaaaagtag 535
||||||||||||
Sbjct: 635 acaaaaaagtag 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
