Query= MSMg01no339_p14.b1 MSMg01no339_p14.b1 CHROMAT_FILE:
MSMg01no339_p14.b1 PHD_FILE: MSMg01no339_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:55 2005
(574 letters)
>mm_chr11_119584823_119585796
Length = 974
Score = 1089 bits (563), Expect = 0.0
Identities = 569/571 (99%)
Strand = Plus / Plus
Query: 4 ggaattctttgctgtgccctagtgttacgatgatcctctgccacactgggctctgtcttt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttgctgtgccctagtgttacgatgatcctctgccacactgggctctgtcttt 263
Query: 64 acattctgtactgaaattttgctattatatgtgagccagagaccctcatccctgtcatag 123
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 264 acattctgtactgaaattttgctattatacgtgagccagagaccctcatccctgtcatag 323
Query: 124 gcttcagcattcatgggacattaccaggcttatctctgccctgtcccccaacttattcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcttcagcattcatgggacattaccaggcttatctctgccctgtcccccaacttattcca 383
Query: 184 cttgctcattgcaagtgagcccaggttttttgttttgttttttgttttttgttttttgtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cttgctcattgcaagtgagcccaggttttttgttttgttttttgttttttgttttttgtt 443
Query: 244 tttctgagacagggtttctctgtgtagccctggctgtcctggaactcactctgtagacca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttctgagacagggtttctctgtgtagccctggctgtcctggaactcactctgtagacca 503
Query: 304 ggctggcctcgaactcagaaatccacctgcctctgcctcttgagtgctgggattaaaggt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggctggcctcgaactcagaaatccacctgcctctgcctcttgagtgctgggattaaaggt 563
Query: 364 gtggggcaccaagcccggcttagcccaagttttaacaaatgagctttcagaatattttaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtggggcaccaagcccggcttagcccaagttttaacaaatgagctttcagaatattttaa 623
Query: 424 caacagctctgctcctgggaagcccttgtgtgtggctctgcctctggtgtcttttgtgtt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caacagctctgctcctgggaagcccttgtgtgtggctctgcctctggtgtcttttgtgtt 683
Query: 484 gcattattttaattagattccctgcaggatttggggtatctgaaggctttccacagtaac 543
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 684 gcattattttaattagattccctgtaggatttggggtatctgaaggctttccacagtaac 743
Query: 544 tgttggttttcccttttctgtgctttctttg 574
|||||||||||||||||||||||||||||||
Sbjct: 744 tgttggttttcccttttctgtgctttctttg 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_p14.g1 MSMg01no339_p14.g1 CHROMAT_FILE:
MSMg01no339_p14.g1 PHD_FILE: MSMg01no339_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:55 2005
(577 letters)
>mm_chr11_119728688_119729664
Length = 977
Score = 965 bits (499), Expect = 0.0
Identities = 544/579 (93%), Gaps = 32/579 (5%)
Strand = Plus / Minus
Query: 1 aatatcaggcaccaggattacagtgttaaataattcaggcacagtatctgtaagggcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aatatcaggcaccaggattacagtgttaaataattcaggcacagtatctgtaagggcaaa 504
Query: 61 tacatcaatgtactgaaagataaatacagagagctgtatcctgacttgccatgaccaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tacatcaatgtactgaaagataaatacagagagctgtatcctgacttgccatgaccaata 444
Query: 121 tactctagatgctgagccaaccaggtgagaactccctcagtgcaagtcctaagctatgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tactctagatgctgagccaaccaggtgagaactccctcagtgcaagtcctaagctatgca 384
Query: 181 gcctgggttaagcatggccgccaggatgctgccttgtgcctccaagggcaaagactaagc 240
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 383 gcctgggttaagcatggccgtcaggaggctgccttgtgcctccaagggcaaagactaagc 324
Query: 241 catcatagtgctttgtgtcaggaactgtgatgaagggacagaactgcctacatacattaa 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 catcagagtgctttgtgtcaggaactgtgatgaagggacagaactgcctacatacattaa 264
Query: 301 acatcagagacttcatgtccacataaacttttaggatgattacactagaaataatttttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acatcagagacttcatgtccacataaacttttaggatgattacactagaaataatttttt 204
Query: 361 aaagacccaagcttgagggacccacataatagaaatggagaagcaatttagttccccctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aaagacccaagcttgagggacccacataatagaaatggagaagcaatttagttccccctg 144
Query: 421 tccactgatctccacaagtgctgtggcat--ggaaacacacacacacacacacacacaca 478
||||||||||||||||||||||||||||| ||
Sbjct: 143 tccactgatctccacaagtgctgtggcatgggg--------------------------- 111
Query: 479 cacacacacacacacacacacacacacacacaccttgtttcctgttttccttttgcctgc 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ---acacacacacacacacacacacacacacaccttgtttcctgttttccttttgcctgc 54
Query: 539 cttcctttggcctcataccataatgtgcaacaaatacaa 577
|||||||||||||||||||||||||||||||||||||||
Sbjct: 53 cttcctttggcctcataccataatgtgcaacaaatacaa 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 18
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
