NACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGCCAATTAACTGTATAAACTAGAAATTATAGTCAAATAG
CAAACAAAGCTATGATTTCCTTAGCTGGGTTATAGACATTCAGATGAAGA
GATGACAGACTCTGAGTTAGGGGAGGAATGAGTGAACTTCTCTTCTGTGA
CCTGCTCTCTCCATCCAGATCTCTAGCTGCTTGAATTTGGCTCCCTGACG
ACACCAGGAAACAGAACTAAGATGGTGAAGGAGGGTCCTGACAAGCCCTT
TAGAAAGAACAGGGTAAGGGTGTGTGCTGCCTCTGAGCTGGTAGTACTCT
CTAGTACTCTCCCTGTCAGAGTCTAATGCTGTCAAATTTATTAGCAAGTT
TGTTTCCAATAGATAAAGTAGCCAGGGGTTGGGGGCATAGCTCACAGCTT
TAGTGCAATCTCTAGCACAGCATCAAATTTTGTGTGATGGTAGAGACCTA
TAATCCCAGAGCATGGGAGGTCGAGGCAGGAGTGTGAAGACCACATGAGA
CCTTAAACAAGTNAAAGTATAGGTGGTGAGCGGNGTGCTGGAAAAAGGAG
CCCCAGTTTCCTTTCCACACAACAAGTAAGGCTAAAACGAGTTTCTCTTC
TCAACTTATATTGAAAGTATTCCAAATAAGTTAAATCAGACCCAGCATTG
TAAAGCTCGAATGAATGGCGGTTTATGGG

NNNCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGGGCACCACTGCCTTCTGC
AGACTCTGGATACCTGGGTTTGTGACATTAGCTGCCCCATTGTACCCCCT
AATCAAGGAAGGGGAGGTGTTTGTGTGGACCCCAGATCACCAGAAAACCT
TTGAGGAAATTAGAAAGGCCCTACTGATGGCCAGCCTTGGCCTTGCCTAA
CCTAACCAAGACTTTCACTCTATGTGGATGAGAGAGCAGGCGTCACCAGA
GGAGTCCTTACTCAGACTTTGAGACCTTGAAAAAGGCCAGTGGCTTACCT
ATCCAAGAAGTTAGACCCTGTTGCCAGTGGGTGTTTTTCTTGCCTGAAAG
CTATTGCTTCCATAGCTCTGCTTGTCAAGGATGCTGATAAGCTCACTCTG
GGACAGCAAATAACTGTAGTGGCACCCCACACTCTTGAAAGCATTATCCG
ACAGCCCCCTGACTGATGGATGACCAACGCTTGTATGACACATTATCTTA
AACTTTTTGACTGAACGAGTGACCTTCTCTCCCCCTGTTGTCCCTCATCC
CACTACCCTACTGCCCGAGACTGATGAATCTTCACCTACTCATAATTGGG
CTGACATTCGGGCAAAAGAAACTGGTAAAGCCAAATGGATCGGAAGGATC
CTCCCTTGGGCCTGGGGAACCG

Query= MSMg01no340_l08.b1 MSMg01no340_l08.b1 CHROMAT_FILE:
MSMg01no340_l08.b1 PHD_FILE: MSMg01no340_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:46 2005
         (507 letters)



>mm_chr11_30384900_30385806
          Length = 907

 Score =  942 bits (487), Expect = 0.0
 Identities = 499/503 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgccaattaactgtataaactagaaattatagtcaaatagcaaacaaagcta 64
           ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gaattctttgccaaagaattgtataaactagaaattatagtcaaatagcaaacaaagcta 545

                                                                       
Query: 65  tgatttccttagctgggttatagacattcagatgaagagatgacagactctgagttaggg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tgatttccttagctgggttatagacattcagatgaagagatgacagactctgagttaggg 485

                                                                       
Query: 125 gaggaatgagtgaacttctcttctgtgacctgctctctccatccagatctctagctgctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gaggaatgagtgaacttctcttctgtgacctgctctctccatccagatctctagctgctt 425

                                                                       
Query: 185 gaatttggctccctgacgacaccaggaaacagaactaagatggtgaaggagggtcctgac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gaatttggctccctgacgacaccaggaaacagaactaagatggtgaaggagggtcctgac 365

                                                                       
Query: 245 aagccctttagaaagaacagggtaagggtgtgtgctgcctctgagctggtagtactctct 304
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 364 aagccctttagaaagaacagggtaagggtgtgtgctgtctctgagctggtagtactctct 305

                                                                       
Query: 305 agtactctccctgtcagagtctaatgctgtcaaatttattagcaagtttgtttccaatag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agtactctccctgtcagagtctaatgctgtcaaatttattagcaagtttgtttccaatag 245

                                                                       
Query: 365 ataaagtagccaggggttgggggcatagctcacagctttagtgcaatctctagcacagca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ataaagtagccaggggttgggggcatagctcacagctttagtgcaatctctagcacagca 185

                                                                       
Query: 425 tcaaattttgtgtgatggtagagacctataatcccagagcatgggaggtcgaggcaggag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tcaaattttgtgtgatggtagagacctataatcccagagcatgggaggtcgaggcaggag 125

                                  
Query: 485 tgtgaagaccacatgagacctta 507
           |||||||||||||||||||||||
Sbjct: 124 tgtgaagaccacatgagacctta 102


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space:   445809
Effective search space used:   445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)