XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
CTCCTATTCACTCCCATTCTCGGGGTGTAATAGTGGGGTGATGGGCAAGC
AACGAATCAGGAGCTGTCACGCCATATCAGGTGCTGAAACATCATGCTGC
GGGTTATAAAAGCAGCTCCATTTTCCTGGTTCGGGATCTTCCTGAGAAGC
AAGCAATAAAGCTCTTGCCGCAGAAGATTCTGGTTTGTTGTGTCTTTCTT
GCCGGAAGGTAGAGGAAAGGATTGGGACAAAAGGACAGAGGGGAAGCTGT
GTTTGGAATGTAAAGTATATTTAAAAGTAAATTATTATACAATCTCAGAG
CCAAGCTATCCTAGGCATTACATGCTTATCTATCCAACTTATAGTACTAC
CTTATGAGCTGTCATATACTGAATACTCAGAGACTAGAAATCTGGTCAAC
TAGAGCTAGTAAAGTCATAAATCTTCGAAGAGAACAGACAGCATTTACTA
ATCCAGCTTAATTCCAAACACTTTCTAAATATTTATGTTACATCTGAAGA
TACGTTTAATTCTCACCACTCCCTTGTCACAGAAACAGATGATTGCCATA
GATGGAGACTATTACAGANAACCACAATTGGGAAAATAAGCAAAGAAAAA
ATAGATTGTGTTAACTCATAGATCACCATTACAATTTCTGAAAGTAAGGG

CGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTCTGGCTAGGACTTCAAATACTAT
GTTGAATAAGTAGGGAGAAAGTGGGTAGCCTTGTCTAGTCCCTGATTTTA
TTGGGATTGCTTCTAGCTTCTAACCAATTAGTTTGATGTTGGCTACTGGT
TTTCTGCAGATTGCTTTTATCATGTTTAGGTATGGGCCTCAAATTCCTGA
TTTTTTCCAAGACTTTTGTCATGAATGGTTGTTGGATTTTGTCAAATGCT
TTCTCTGAATTTAACGTAATGATCATGTGGTTTGTGTCTTTGATTTTGTT
TATATAGTTGATTACTTTAATGGATTTCCATATATTAAACCATCCCTGCA
TCCCTGAAATGAAACCTGCTTGTTCAAGATGGATGATTGCTTTAATGTGT
TCTTTGATTTGGTTAGCAAGATTTTTTTTGAGTATTTTTGTGTTGATATT
CATAAGGAATATTGATTCTGAAGTTCCCTATCTTTGTTGTGTCTTTCCTG
TAGTTTAGGCATCATAACAATTGACCTCTTCTTGTGATTGTAATTGCTTA
AATTACCTTTCACCTTTCTATCGTTGTTATATTCTCGTCACTGATCTTTT
ACTATTATCTTCTTCTTTTATTCCTTTATAATTTCTCTTGTATTTTTCTC
CTATATTGTACTCATTTAATTTATTTTN

Query= MSMg01no345_i17.b1 MSMg01no345_i17.b1 CHROMAT_FILE:
MSMg01no345_i17.b1 PHD_FILE: MSMg01no345_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:01 2005
         (577 letters)



>mm_chr11_13257860_13258836
          Length = 977

 Score = 1046 bits (541), Expect = 0.0
 Identities = 565/573 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcactcctattcactcccattctcggggtgtaatagtggggtgatgggcaagcaac 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatgggcaagcaac 746

                                                                       
Query: 65  gaatcaggagctgtcacgccatatcaggtgctgaaacatcatgctgcgggttataaaagc 124
           ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 745 gaatcaggagctgtcacgccatatcaggtgctgaaacgtcatgctgcaggttataaaagc 686

                                                                       
Query: 125 agctccattttcctggttcgggatcttcctgagaagcaagcaataaagctcttgccgcag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agctccattttcctggttcgggatcttcctgagaagcaagcaataaagctcttgccgcag 626

                                                                       
Query: 185 aagattctggtttgttgtgtctttcttgccggaaggtagaggaaaggattgggacaaaag 244
           ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 625 aagattctggtttgttgcgtctttcttgccggaaggtagagggaaggattgggacaaaag 566

                                                                       
Query: 245 gacagaggggaagctgtgtttggaatgtaaagtatatttaaaagtaaattattatacaat 304
           |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 565 gacagaggggaagctgtgtttggaatgtaaagtaaatttaaaaataaattattatacaat 506

                                                                       
Query: 305 ctcagagccaagctatcctaggcattacatgcttatctatccaacttatagtactacctt 364
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 505 ctcagagccaagctatcctaggcattacatgcttatttatccaacttatagtactacctt 446

                                                                       
Query: 365 atgagctgtcatatactgaatactcagagactagaaatctggtcaactagagctagtaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgagctgtcatatactgaatactcagagactagaaatctggtcaactagagctagtaaa 386

                                                                       
Query: 425 gtcataaatcttcgaagagaacagacagcatttactaatccagcttaattccaaacactt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtcataaatcttcgaagagaacagacagcatttactaatccagcttaattccaaacactt 326

                                                                       
Query: 485 tctaaatatttatgttacatctgaagatacgtttaattctcaccactcccttgtcacaga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctaaatatttatgttacatctgaagatacgtttaattctcaccactcccttgtcacaga 266

                                            
Query: 545 aacagatgattgccatagatggagactattaca 577
           |||||||||||||||||||||||||||||||||
Sbjct: 265 aacagatgattgccatagatggagactattaca 233


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space:   548289
Effective search space used:   548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)