Query= MSMg01no346_l08.b1 MSMg01no346_l08.b1 CHROMAT_FILE:
MSMg01no346_l08.b1 PHD_FILE: MSMg01no346_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:28 2005
(309 letters)
>mm_chr11_60091810_60092515
Length = 706
Score = 547 bits (283), Expect = e-160
Identities = 302/309 (97%), Gaps = 3/309 (0%)
Strand = Plus / Plus
Query: 1 aagaaaaattagtgaggctgaagggcctgaagaggctgcagaggtgtgtgattaagcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagaaaaattagtgaggctgaagggcctgaagaggctgcagaggtgtgtgattaagcatt 260
Query: 61 tcaagcaaaaacccagggatgctctggaagacttgctagtgagcaaggcactggttggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaagcaaaaacccagggatgctctggaagacttgctagtgagcaaggcactggttggca 320
Query: 121 cctgcatcgggaattgatgggaggtggggggaagaagcaagtacattcttcagggaatag 180
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 cctgcatcgggaactgatgggaggtggggg-aagaagcaagtacattcttcagggaatag 379
Query: 181 agcagatgaaaagctgacctgagccacacttccaagcctgcttcctgatactacctgtca 240
||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct: 380 agcagatgaaaagctgacctgagccacacttccaagcctacatcctga--ctacctgtca 437
Query: 241 tgtgacatcaggctacctgtacctgcttcttatgctaccttgaagacaagtcacactgtc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgtgacatcgggctacctgtacctgcttcttatgctaccttgaagacaagtcacactgtc 497
Query: 301 ccagaagcc 309
|||||||||
Sbjct: 498 ccagaagcc 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 706
Length adjustment: 9
Effective length of query: 300
Effective length of database: 697
Effective search space: 209100
Effective search space used: 209100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_l08.g1 MSMg01no346_l08.g1 CHROMAT_FILE:
MSMg01no346_l08.g1 PHD_FILE: MSMg01no346_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:28 2005
(438 letters)
>mm_chr11_60296796_60297633
Length = 838
Score = 801 bits (414), Expect = 0.0
Identities = 432/438 (98%)
Strand = Plus / Minus
Query: 1 catctcctccactaaagtgcacatacaagatcctgatctattggggggcttgctcagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 catctcctccactaaagtgcacatacaagatcctgatctattggggggcttgctcagcaa 579
Query: 61 gggtgctgggctaaggatcctaagcagacagggcaaccacaggatggctggatggtaggt 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 578 gggtgctgggctaaggatcctaagcagacagggcaaccacaggacggctggatggtaggt 519
Query: 121 ctcacctgttgcatgacgtcccgtctctggttcatggcagccaggcagcgcagaatcagt 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ctcacctgctgcatgacgtcccgtctctggttcatggcagccaggcagcgcagaatcagt 459
Query: 181 ttcgtagcctcagtctttccagagccactctccccactggtggaacaggagcccagagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ttcgtagcctcagtctttccagagccactctccccactggtggaacaggagcccagagca 399
Query: 241 ttggctctcctctgcctctccatgcgcactccaacccaggagccgtgaagaggcccaaag 300
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 398 ttggctctcctctgcctctccatgcccactccaacccaggagccatgaagaggcccaaag 339
Query: 301 gcacccaatacttttcctaggttcatagtaggctcacagctcaccatctagatgtctgga 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 338 gcacccaatacttttcctaggttcatagtaggctcacatctcaccatctagatgtctgga 279
Query: 361 tgcaaactactgcccaaggtgcccctatctgtcccccacctgtgcacagcctgactcacc 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 278 tgcaaactactgcccaaggtgcccctatctgtcccccacctgggcacagcctgactcacc 219
Query: 421 tgatgatgacacactggt 438
||||||||||||||||||
Sbjct: 218 tgatgatgacacactggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
