Query= MSMg01no346_n18.b1 MSMg01no346_n18.b1 CHROMAT_FILE:
MSMg01no346_n18.b1 PHD_FILE: MSMg01no346_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:39 2005
(480 letters)
>mm_chr12_53767992_53768871
Length = 880
Score = 702 bits (363), Expect = 0.0
Identities = 378/383 (98%)
Strand = Plus / Minus
Query: 5 gaattcacttacattacagcttgcttgtgttggtcaccctctgattggcacttctggcct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gaattcacttacattacagcttgcttgtgttggtcaccctctgattggcacttctggcct 324
Query: 65 ttaaaatgaccctgaagataccagcagcccaatcattgtcactgggtgcctagtgttcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttaaaatgaccctgaagataccagcagcccaatcattgtcactgggtgcctagtgttcag 264
Query: 125 acatcacaatttctttttttttttttttttggttttggttcttttgggttttgttgttgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acatcacaatttctttttttttttttttttggttttggttcttttgggttttgttgttgt 204
Query: 185 tggtttttcgagacagggtttctctgtgtagccctggctttcctggtactcaagctgtag 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tggttttttgagacagggtttctctgtgtagccctggctttcctggtactcaagctgtag 144
Query: 245 accaggctggcctcgaactcagaaatccgcctgcctctgcctccctactgctgggattaa 304
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 143 accaggctggcctcgaactcagaaatccgcctgcctctgcctcccgaatgctgggattaa 84
Query: 305 aggcgtgcgccaccacgtccggctgacatcacaatttcttactcctgtctttctgcaact 364
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 aggcgtgtgccaccaggtccggctgacatcacaatttcttactcctgtctttctgcaact 24
Query: 365 cacagagaactagtaaattcagt 387
|||||||||||||||||||||||
Sbjct: 23 cacagagaactagtaaattcagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_n18.g1 MSMg01no346_n18.g1 CHROMAT_FILE:
MSMg01no346_n18.g1 PHD_FILE: MSMg01no346_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:39 2005
(479 letters)
>mm_chr11_71153338_71154215
Length = 878
Score = 880 bits (455), Expect = 0.0
Identities = 473/479 (98%), Gaps = 1/479 (0%)
Strand = Plus / Plus
Query: 1 ctttgaattgctacctgtatcatgttcctattcttgaataagttactagccttgaacggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttgaattgctacctgtatcatgttcctattcttgaataagttactagccttgaacggg 260
Query: 61 tctatggggactatatcttggccagccacatacttgatgaaattggagaggtttttctgt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccatggggactatatcttggccagccacatacttgatgaaattggagaggtttttctgt 320
Query: 121 ccatatttctgtaccaaatttaaggaactgagctgagtttgtgattgtatataggatact 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 ccatatttctgtaccaaatttaaggaactgagctgagtttgtgattgtgtataggatact 380
Query: 181 cccatttttttaaaccattctggaagacaggatcaatggagagggccatgaatatctcaa 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccatttttttaaatcattctggaagacaggatcaatggagagggccatgaatatctcaa 440
Query: 241 tatagcagtggaactcagttttttttttttctggttgcctgtatttggaaaggagccagc 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 tatagcagtggaactcagttttttttttt-ctggttgcctgtatttggaaaggagccagc 499
Query: 301 tcttgaccttggctgagagctgataatggtgtttttatcactgcaacagaaattctaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcttgaccttggctgagagctgataatggtgtttttatcactgcaacagaaattctaaga 559
Query: 361 tagacatctctaagctgtttccatttcttagctattataaatagaacatcaataagcata 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 560 tagacatctctaagctgtttccatttcttagctattataaatagaacagcaataagcata 619
Query: 421 gatgagtagatatttctggaacctctagagtaggatatagtagtctttggaatgcccaa 479
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gatgagtaggtatttctggaacctctagagtaggatatagtagtctttggaatgcccaa 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 878
Length adjustment: 10
Effective length of query: 469
Effective length of database: 868
Effective search space: 407092
Effective search space used: 407092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
