Query= MSMg01no348_l04.b1 MSMg01no348_l04.b1 CHROMAT_FILE:
MSMg01no348_l04.b1 PHD_FILE: MSMg01no348_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:05 2005
(179 letters)
>mm_chr11_53870229_53870807
Length = 579
Score = 271 bits (140), Expect = 2e-77
Identities = 161/174 (92%), Gaps = 12/174 (6%)
Strand = Plus / Minus
Query: 8 ggaattctcatgttc--tcccaggtttagccacatggccttcctcaggatgaccagcact 65
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggaattctcatg--ccatcccaggtttagccacatggccttcctcaggatgaccagcact 266
Query: 66 ggctcccagtgtatgtgagacctcccattcatggataggaatatgtaaggagactggctg 125
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 ggctcccagtgtatgtgagacctcgcattcatggataggaatatgtaaggagactggc-- 208
Query: 126 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtattgtccttacccat 179
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ------tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtattgtccttacccat 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no348_l04.g1 MSMg01no348_l04.g1 CHROMAT_FILE:
MSMg01no348_l04.g1 PHD_FILE: MSMg01no348_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:05 2005
(216 letters)
>mm_chr11_53689604_53690219
Length = 616
Score = 400 bits (207), Expect = e-116
Identities = 213/215 (99%)
Strand = Plus / Plus
Query: 1 catactttccaggatgaatgtgtagtctggacactcatgctgcccaaaggcagtgccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catactttccaggatgaatgtgtagtctggacactcatgctgcccaaaggcagtgccaca 260
Query: 61 atgatactaatgactgcaggaaatggaaagacagttgttatgtgtaaatccacatattca 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgatgctaatgactgcaggaaatggaaagacagttgttatgtgtaaatccacatattca 320
Query: 121 taataatttttttaaaatcaggtaaaacataattcatggtaaatgaggactggtcattta 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 taataatttttttaaaatcaggtaaaacataattcgtggtaaatgaggactggtcattta 380
Query: 181 tcctgacttccctctgtcaaagatatgaataacta 215
|||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctgacttccctctgtcaaagatatgaataacta 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 216
Length of database: 616
Length adjustment: 9
Effective length of query: 207
Effective length of database: 607
Effective search space: 125649
Effective search space used: 125649
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
