TTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCATTATATTTTCTATAAATTGAAGTCAAAGGGATCAATGTTAG
TGTCAGCTTGGCCTGTAAGTTTATGTATAAGAGTGGATTCAAAACAACCC
TGAGATTCCATCCCATACCAGTCAGAATGGCTAAGATCAAAAATTCAGGT
GACAGGAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTG
TTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTGTT
TCCTCAAAAAATTGGACATAGTACTACCGGAGGATCCCGCAATACCTCTC
CTGGGCATATATCCAGAAGATATCCCAACCAGTAAGAAGGACACATGCTC
CACTATGTTCATAGCCGCCTTATTTATAATAGCCAGAAGCTGGAAAGAAT
CCAGATGCCCCTCAACAGAGGAATGGATACAAAAAATGTGGTACATTTAC
ACAATGGAGTACTACTCAGCTATTAAAAAGAACGAATTTATGAAATTCCT
AGGCAAATGGTTGGACCTGGAGGGCAACATCCTTAGTAACACAATCACAA
AAGAACTCAAAAATGATATGTACTCACTGATAAGTGGATATTAGTCCAGA
AACTTAGTATAGCGAGATATAAGGTACAATTTGCAAAACACATGATACTG
AAGAACGAAGACCAAAATGTGGACACTTT

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGTCCATCAAAGGAGAAAATGCACCGT
GGCTAGAATGATTTGATTGGATGGCAGGAGCTTTATCATAGCTTATTTCT
ATCTCCACGTATCTCTATATATCATAATTGTCTAGCTGGAACACGAAGTG
CATATTACCCTCAAGGGCTTCCATAGGACTTCCATAGGACTTCTAACTAT
TCCTGTTCCAGAAGTCATATTTCCCAAAGGAACACCTCCAGTGTGTTTGT
GTATATGTGTGTGTGTGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGT
GCGTGTGTGTGTGTGTGTGTGTGTTGGAAGGAAGAATTGTTCAGCATGAG
TTATGAATGATGTTTCACATTCAAATCATAACAGTTGCAATGTTAAGTCA
GAGCAATACCTGGAATTATGTATATATTTTAGGCATATGAAACTCCTTTG
AAGTCTGACAGATTCACATGTTTTATTTTTCATGTACCTTATGTGTTTAT
ATGTATGAATCAGGTGGTATATATCTACTTTCTCTGTAGTTACATAGGTG
ATACTGTGAGAAATTAAAATTGCCTAGTTACGAATAGTCATCTTTGTAAA
GGTATATATATTTAATGCTTGATACCTCATTTTAATCTTTGGTATCTCAT
ATAACCAATAAAAACAGATATCTTTTGGTTGAATTTCATAGCCACACTAT
TTAACCG

Query= MSMg01no349_k03.g1 MSMg01no349_k03.g1 CHROMAT_FILE:
MSMg01no349_k03.g1 PHD_FILE: MSMg01no349_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:18 2005
         (609 letters)



>mm_chr11_92139103_92140111
          Length = 1009

 Score =  977 bits (505), Expect = 0.0
 Identities = 568/609 (93%), Gaps = 34/609 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtccatcaaaggagaaaatgcaccgtggctagaatgatttgattggatggcaggagctt 60
           |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 agtccatcaaagcagaaaatgcactgtggctagaatgatttgattggatggcaggagctt 260

                                                                       
Query: 61  tatcatagcttatttctatctccacgtatctctatatatcataattgtctagctggaaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatcatagcttatttctatctccacgtatctctatatatcataattgtctagctggaaca 320

                                                                       
Query: 121 cgaagtgcatattaccctcaagggcttccataggacttccataggacttctaactattcc 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 cgaagtgcatattaccctcaagggcttccataggacttccataggacttctaactagtcc 380

                                                                       
Query: 181 tgttccagaagtcatatttcccaaaggaacacctccagtgtgtttgtgtatatgtgtgtg 240
           ||||||||||||||||||||||||||||||||||||||||||          ||||||||
Sbjct: 381 tgttccagaagtcatatttcccaaaggaacacctccagtgtg----------tgtgtgtg 430

                                                                       
Query: 241 tgtgtgtgcgtgtgcgtgtgcgtgtgcgtgtgcgtgtgcgtgtgtgtgtgtgtgtgtgtg 300
           |||||||                    ||||  ||||  |||||||||||||||||||||
Sbjct: 431 tgtgtgt--------------------gtgt--gtgt--gtgtgtgtgtgtgtgtgtgtg 466

                                                                       
Query: 301 ttggaaggaagaattgttcagcatgagttatgaatgatgtttcacattcaaatcataaca 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttggaaggaaaaattgttcagcatgagttatgaatgatgtttcacattcaaatcataaca 526

                                                                       
Query: 361 gttgcaatgttaagtcagagcaatacctggaattatgtatatattttaggcatatgaaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gttgcaatgttaagtcagagcaatacctggaattatgtatatattttaggcatatgaaac 586

                                                                       
Query: 421 tcctttgaagtctgacagattcacatgttttatttttcatgtaccttatgtgtttatatg 480
           ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 587 tcctttgaaatctgacagattcacatgttttatttttcatttaccttatgtgtttatatg 646

                                                                       
Query: 481 tatgaatcaggtggtatatatctactttctctgtagttacataggtgatactgtgagaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tatgaatcaggtggtatatatctactttctctgtagttacataggtgatactgtgagaaa 706

                                                                       
Query: 541 ttaaaattgcctagttacgaatagtcatctttgtaaaggtatatatatttaatgcttgat 600
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 707 ttaaaattgcctagttacgaatagttatctttgtaaaggtatatatatttaatgcttgat 766

                    
Query: 601 acctcattt 609
           |||||||||
Sbjct: 767 acctcattt 775


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space:   598401
Effective search space used:   598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)