NGGCGAGGAATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCCAGTTTTTTCTATTGCTGATTCCTCTTCCTCCTCCT
CTTCCTCACCCTTCCTCTTCCTCCCCCTCTTCCTCTTCCTCCTCCTTTTC
TCCCTCTTCCTCCTCTTCTTCTTCCTTCTTCCCCTCTTCCTCCTCCCCCT
CTTCTCAATGTAGCCCAGGGTGGCCTCACACTAGCTATGTAACTTAGAGC
TTTTGCCCCCGTCTACTACCTTCCTAGTGCTAAGGTTATGGACACTCAGC
ACTGTAACCATTTTCTGCAGTGCTGCGGATGGAACCCAGAGTTTCCTGTA
TGATAGCCACGTACTCTACCAAGTGATCTACATCGCCAGCCCTGAAATAT
TTTAATAAAGAGTCCCCTGTTGTATGTGAGGGTGCATTCTAAGACACCAG
TGCCTGCCTTATGCCACTAATTGTGCTGAACCCCACATATGTTTTTAAGT
ATACTCATATACCTATGATAAAGCTTAATTTAACAAATTAACCACAGATT
AGCAACAATAGCTAGTTGTTATTGTTAAATTAAAAAATTATAGTGATTTA
AGGCATTAAACTTCTGTGAATGTGATCACAAATTATCTCACTGTATTTTT
CACATTTGCTAACAACAGCACTTTATAACCTAATCCATGTGCACCTAAAG
TAGCAAACCTTTCTGCTCTTGAAACTA

NNNNNNNNCCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCCCATTTCAAAA
ACCAATATTGCCTCTGTTTCTTGGAGACCACAAAGCAGATGTCTCCAAAT
AACTGGATCCAAGACTTTCTTAGTTTCAAACTCTCCTGTTCAGTCTCCAG
CCAACTTCTCCAGAACACCCTCCTCCAACGTGTGTGTGTGTGTGTGTGTG
TGTGTTCTGCCTGCTTCCTTTAGCCTAACCTTTCCTCTGAGACACAAACT
CGCTATATAAAGAGCCCCAGCATATACATATAGCCCTTGGGGTTCCAATA
AATGCACAGGCTCAGAGCTGATGTCTGAGCTGAGACCTGGGCTTTTCTGG
ACTGTGTCACTCGCAGTGATGATGATATTGTTGATCTTTGATCTCTCAGG
AAAGTCACTGAAAACGTTGTCAGAGATGCCCGCAGCGTGCTTCACCACCA
ATGGCAGGATATGTAGGAACTGTGGTGTACACCTTTAATCCCAGCACTCG
GGAGGCAGAGGCAGGTGGATTTCTGAGATCAAGGCCAGCCTGTTCTACAG
AGTAAAGTTCAGGACAGCCAGGGCTAAACAGAGAAACCCTGTCTCAAAAA
AAACCCAACAAACAAACTAAGAATAAAGCTATGGGGGGCTAACTAGGCTT
GGCCCAAAAAGGTTTTGAAGTAAACTTGTTTCCCCCCCCTGGGG

Query= MSMg01no351_e15.g1 MSMg01no351_e15.g1 CHROMAT_FILE:
MSMg01no351_e15.g1 PHD_FILE: MSMg01no351_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:30 2005
         (468 letters)



>mm_chr11_64769081_64769950
          Length = 870

 Score =  772 bits (399), Expect = 0.0
 Identities = 456/485 (94%), Gaps = 18/485 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctcccatttcaaaaaccaatattgcctctgtttcttggagaccacaaagcagatgtctc 60
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 187 tctcccatttcaaaaaccaatattgcctctgttttttggagaccacaaagcagatgtctc 246

                                                                       
Query: 61  caaataactggatccaagactttcttagtttcaaactctcctgttcagtctccagccaac 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 247 caaataactggatccaagactttcttagtttcaaaccctcctgttcagtctccagccaac 306

                                                                       
Query: 121 ttctccagaacaccctcctccaac--------------gtgtgtgtgtgtgtgtgtgtgt 166
           ||||||||||||||||||||||||              ||||||||||||||||||||||
Sbjct: 307 ttctccagaacaccctcctccaacctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 366

                                                                       
Query: 167 gtgttctgcctgcttcctttagcctaacctttcctctgagacacaaactcgctatataaa 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gtgttctgcctgcttcctttagcctaacctttcctctgagacacaaactcgctatataaa 426

                                                                       
Query: 227 gagccccagcatatacat---atagcccttggggttccaataaatgcacaggctcagagc 283
           ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gagccccagcatatacattagatagcccttggggttccaataaatgcacaggctcagagc 486

                                                                       
Query: 284 tgatgtctgagctgagacctgggcttttctggactgtgtcactcgcagtgatgatgatat 343
           ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 487 tgatgtctgaggtgagacctgggcttttctggattgtgtcactcgcagtgatgatgatat 546

                                                                       
Query: 344 tgttgatctttgatctctcaggaaagtcactgaaaacgttgtcagagatgcccgcagcgt 403
           ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| || ||
Sbjct: 547 tgttgatctttgatctctcaggaaagtcactaaaaacgt-gtcagagatgcccgtagtgt 605

                                                                       
Query: 404 gcttcaccaccaatggcaggatatgtaggaactgtggtgtacacctttaatcccagcact 463
           ||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 606 gcttcaccgtcaatggcaggatatgtaggaactgtggtgtacacctttaattccagcact 665

                
Query: 464 cggga 468
            ||||
Sbjct: 666 tggga 670


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 870
Length adjustment: 10
Effective length of query: 458
Effective length of database: 860
Effective search space:   393880
Effective search space used:   393880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)