Query= MSMg01no352_b05.b1 MSMg01no352_b05.b1 CHROMAT_FILE:
MSMg01no352_b05.b1 PHD_FILE: MSMg01no352_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:29 2005
(193 letters)
>mm_chr11_98100535_98101127
Length = 593
Score = 337 bits (174), Expect = 4e-97
Identities = 183/186 (98%)
Strand = Plus / Minus
Query: 5 gaattcaggccattacgcttgaggacaagtgcttttacatgttgaactacctacttaggc 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 390 gaattcaggccatcaagcttgaggacaagtgcttttacatgttgaactacctatttaggc 331
Query: 65 tagccttgaactcacaggcttaaaaatattctcactgccttatccttttaaacagcctgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tagccttgaactcacaggcttaaaaatattctcactgccttatccttttaaacagcctgt 271
Query: 125 actacaagtaccagtatttccaaatagagcatatctgtatatgtataagaacaaaatcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 actacaagtaccagtatttccaaatagagcatatctgtatatgtataagaacaaaatcag 211
Query: 185 aaaggt 190
||||||
Sbjct: 210 aaaggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no352_b05.g1 MSMg01no352_b05.g1 CHROMAT_FILE:
MSMg01no352_b05.g1 PHD_FILE: MSMg01no352_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:29 2005
(429 letters)
>mm_chr11_97957674_97958502
Length = 829
Score = 735 bits (380), Expect = 0.0
Identities = 424/446 (95%), Gaps = 17/446 (3%)
Strand = Plus / Plus
Query: 1 caggacagcctacataatagataccctgcttcaaaatgaatgaatgaatgaatgaatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 caggacagcctacataatagataccctgcttcaaaatgaatgaatgaatgaatgaatgaa 243
Query: 61 tgaatga----tagtaaacacacgaacttctgcagaactaaaaaaatcttctattgatta 116
||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 244 tgaatgaatgatagtaaacacacgaacttctacagaactaaaaaaatcttctatggatta 303
Query: 117 caaagacataagtgacctcagggtgggctttaagatgtggaaaaaggaattttaaggatt 176
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 304 caaagacataagtgacctcagggtgggctttaagatgtggagaaaggaattttaaggatt 363
Query: 177 tttcctacaatgacca-g----ta-aag-----ta--agatcccttggggattcatgtca 223
|||||||||||||||| | || ||| || |||||||||||||||||||||||
Sbjct: 364 tttcctacaatgaccaagatcctacaagattcctacaagatcccttggggattcatgtca 423
Query: 224 tttacatgtcatcacagaacaaagccagcaggacaacagcaacaagggtggtgacattgc 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tttacatgtcatcacagaacaaagccagcaggacaacagcaacaagggtggtgacattgc 483
Query: 284 tgtctgcttaaaggctcaaaatgccaaaaggaccatggcagcttcttcttcccttgattt 343
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 484 tgtctgtttaaaggctcaaaatgccaaaaggaccacggcagcttcttcttcccttgattt 543
Query: 344 ttttgagctaaataaacaacgtttacctaagtcgagggcagttctgacctagagcgttca 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ttttgagctaaataaacaacgtttacctaagtcgagggcagttctgacctagagcgttca 603
Query: 404 ggatggcatctgtgatattggagcac 429
||||||||||||||||||||||||||
Sbjct: 604 ggatggcatctgtgatattggagcac 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
