Query= MSMg01no353_f21.b1 MSMg01no353_f21.b1 CHROMAT_FILE:
MSMg01no353_f21.b1 PHD_FILE: MSMg01no353_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:13 2005
(527 letters)
>mm_chr11_70680792_70681718
Length = 927
Score = 992 bits (513), Expect = 0.0
Identities = 522/525 (99%), Gaps = 2/525 (0%)
Strand = Plus / Minus
Query: 4 ggaattcatagagctatgcctgtttctgcctcagccttctgagtgctgggattaaatgcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ggaattcatagagctatgcctgtttctgcctcagccttctgagtgctgggattaaatgcc 730
Query: 64 tgagtttaaggctatttttatgactcagtattttggcatgagggatttaagtttaaatca 123
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 729 tgagtttaaggctatttttatgattcagtattttggcatgagggatttaagtttaaatca 670
Query: 124 gctgaaaacaatgtactcatataatatttctctatcattctaggtaaacaattgctaata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gctgaaaacaatgtactcatataatatttctctatcattctaggtaaacaattgctaata 610
Query: 184 aaaaccacaaatctcatcaacacctttaatataaaataattggtttaggatagcctaaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aaaaccacaaatctcatcaacacctttaatataaaataattggtttaggatagcctaaag 550
Query: 244 cctttatcgtttacaagaacaaagcttgatgcaacataaactgtccgttaggatcatgtt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cctttatcgtttacaagaacaaagcttgatgcaacataaactgtccgttaggatcatgtt 490
Query: 304 tgattaagttgtaagacaaatcaaatttcccctgtacagttaacacagaaaatgtaaact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgattaagttgtaagacaaatcaaatttcccctgtacagttaacacagaaaatgtaaact 430
Query: 364 gacatacttcttcattctctctacatttgtgctatagcaacactatagtatcaaatctac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gacatacttcttcattctctctacatttgtgctatagcaacactatagtatcaaatctac 370
Query: 424 attagggattacttattaaatgtttattataaattagtaataacataaaggttatatttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 attagggattacttattaaatgtttattataaattagtaataacataaaggttatatttt 310
Query: 484 acttancaagg-aattgaataaattacatatgaaattttcagatc 527
||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 309 actta-caaggaaattgaataaattacatatgaaattttcagatc 266
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_f21.g1 MSMg01no353_f21.g1 CHROMAT_FILE:
MSMg01no353_f21.g1 PHD_FILE: MSMg01no353_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:13 2005
(408 letters)
>mm_chr11_70502973_70503780
Length = 808
Score = 781 bits (404), Expect = 0.0
Identities = 407/408 (99%)
Strand = Plus / Plus
Query: 1 tcttaaagctcttaactatgctgcctctctctaatccctgcttggcttgcagaggcccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttaaagctcttaactatgctgcctctctctaatccctgcttggcttgcagaggcccat 260
Query: 61 gccacgcctccttactcattgatgattccctggcgccttctcaggtcctccagatgataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccacgcctccttactcattgatgattccctggcgccttctcaggtcctccagatgataa 320
Query: 121 gtaactgctctaactcgggctggaatgcttccaggtcccttctgcattctttccaaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaactgctctaactcgggctggaatgcttccaggtcccttctgcattctttccaaatgc 380
Query: 181 agcttctttctctttcttctccaaagcttctcaggaggagggagcccctcaagagggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcttctttctctttcttctccaaagcttctcaggaggagggagcccctcaagagggtgc 440
Query: 241 aggctaggtcgggagcaatcagtggccctctgtgtcaagaaggaagaatagttgctaaat 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggctaggccgggagcaatcagtggccctctgtgtcaagaaggaagaatagttgctaaat 500
Query: 301 atagatagatgtcagtttcagggaaacttgggctggagaatctggggttttttggaagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atagatagatgtcagtttcagggaaacttgggctggagaatctggggttttttggaagct 560
Query: 361 taggtatgatctagaaaacaggatacttgatttacaataaaaacaggg 408
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taggtatgatctagaaaacaggatacttgatttacaataaaaacaggg 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
