Query= MSMg01no353_i17.b1 MSMg01no353_i17.b1 CHROMAT_FILE:
MSMg01no353_i17.b1 PHD_FILE: MSMg01no353_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:27 2005
(464 letters)
>mm_chr11_20864943_20865806
Length = 864
Score = 822 bits (425), Expect = 0.0
Identities = 431/433 (99%)
Strand = Plus / Minus
Query: 28 tcatgcttgagtgaagaccatccaacacatatgttccccataaggcacatcactgtcttc 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 tcatgcttgagtgaagaccatccaacacatatgttccccataaggcacatcactgtcttc 805
Query: 88 cagtcttaagaacattagacaccgtgtcaacactatacttaagggttattccaaacagtg 147
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 804 cagtcttaagaacattagacaccgtgtcaacactgtacttaagggttattccaaacagtg 745
Query: 148 ataccgtccagaaaaatggaaaattgtggggctaaggggaccaccagaagaatcctttta 207
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 744 ataccgtccagaaaaatggaaaattgtggggttaaggggaccaccagaagaatcctttta 685
Query: 208 cagctttgagaaatcaaaggagaaatcattgtctcactgggcctcacagggaaatgtgca 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cagctttgagaaatcaaaggagaaatcattgtctcactgggcctcacagggaaatgtgca 625
Query: 268 cactgagtgtctcatctgccccattccagacacgtttgtaaatggttacacaaaagaagc 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cactgagtgtctcatctgccccattccagacacgtttgtaaatggttacacaaaagaagc 565
Query: 328 acacatcggtttctggattacacatgaatttaactgctcagattcacaaatacaggccca 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acacatcggtttctggattacacatgaatttaactgctcagattcacaaatacaggccca 505
Query: 388 tgaataatgaaggtggattctgtatactaagaagatttatttccaggaattggcctgggg 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaataatgaaggtggattctgtatactaagaagatttatttccaggaattggcctgggg 445
Query: 448 gtgggaatgggaa 460
|||||||||||||
Sbjct: 444 gtgggaatgggaa 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_i17.g1 MSMg01no353_i17.g1 CHROMAT_FILE:
MSMg01no353_i17.g1 PHD_FILE: MSMg01no353_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:27 2005
(389 letters)
>mm_chr11_20732616_20733404
Length = 789
Score = 681 bits (352), Expect = 0.0
Identities = 376/384 (97%), Gaps = 2/384 (0%)
Strand = Plus / Plus
Query: 7 agggagggacaaagggagggacaaagggagggctggctcaacctccagaagaggttgctg 66
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 agggagggaggaagggagggacaaagggagggctggctcaacctccagaagaggttgctg 266
Query: 67 gctcaggaactgtaaagataaagtttgcaagatgggacctgtaggttaatgctggacatg 126
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 267 gctcaggaactgtaaagataaagtttgcaagatgggacctgtagattaatgctggacatg 326
Query: 127 tggagcagaagtgaaggctgaggtcttggagacaccttttacttgaagggaacagaaaga 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tggagcagaagtgaaggctgaggtcttggagacaccttttacttgaagggaacagaaaga 386
Query: 187 cactggaagtttctgagcaagggagaggaggtttggttttggaggttctggggagcaaac 246
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cactggaagtttctgagccagggagaggaggtttggttttggaggttctggggagcaaac 446
Query: 247 ccatggccttgtatgtgcagggcaagcatactggcact-aggtcacatcatggacctgta 305
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 447 ccatggccttgtatgtgcagggcaagcatactggcactgag-tcacatcatggacctgta 505
Query: 306 ctctctgatgttgatgcatccctgtagctgatgtaacaagggccagagaacaagcagcat 365
|||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 506 ctctctgatgttgacgcatccctgtagctgatgtaacaagggccagagaacaggcagcat 565
Query: 366 gtagccagggcaggaggacaggag 389
||||||||||||||||||||||||
Sbjct: 566 gtagccagggcaggaggacaggag 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
