Query= MSMg01no354_n21.b1 MSMg01no354_n21.b1 CHROMAT_FILE:
MSMg01no354_n21.b1 PHD_FILE: MSMg01no354_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:09 2005
(357 letters)
>mm_chr11_36031889_36032645
Length = 757
Score = 613 bits (317), Expect = e-180
Identities = 347/363 (95%), Gaps = 12/363 (3%)
Strand = Plus / Plus
Query: 5 gaattcccttaacctcccagaggcaatccagcatctcccttcattgccagagcattgttt 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gaattcccttaacctcaaagaggcaatccagcatctcccttcattgccagagcattgttt 256
Query: 65 ttttttt-------ttttttttggttttgctttt---ttttttttttggcatttggaaag 114
||||||| |||||||| ||||| |||| |||||||||||||||||||||||
Sbjct: 257 tttttttgttgttttttttttt--ttttgtttttgctttttttttttggcatttggaaag 314
Query: 115 caaagccattgagttttattttaatttaaggcaattttgaaattgcaccctttttataaa 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 caaagccattgagttttattttaatttaaggcaattttgaaattgcaccctttttataaa 374
Query: 175 ggccagtgggcaaaacccacaggacaatgctttaacaaacagcctccccatcccacaatt 234
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 375 ggccagtgggcaaaacccacaggacaatgctttagcaaacagcctccccatcccacaatt 434
Query: 235 catttggaaaataccaaagccagtggtgttatacaagttggactctatattttaatgcac 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 catttggaaaataccaaagccagtggtgttatacaagttggactctatattttaatgcac 494
Query: 295 acaggaaagtctaagattctggtctccccagatcacaatgaaaaagatgtccctatttgt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acaggaaagtctaagattctggtctccccagatcacaatgaaaaagatgtccctatttgt 554
Query: 355 tag 357
|||
Sbjct: 555 tag 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space: 260304
Effective search space used: 260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_n21.g1 MSMg01no354_n21.g1 CHROMAT_FILE:
MSMg01no354_n21.g1 PHD_FILE: MSMg01no354_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:09 2005
(460 letters)
>mm_chr11_36145129_36145988
Length = 860
Score = 890 bits (460), Expect = 0.0
Identities = 460/460 (100%)
Strand = Plus / Minus
Query: 1 tcagatcttgacttatcaagcacactgccagggaaaggtggcagaagccatgtggcggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tcagatcttgacttatcaagcacactgccagggaaaggtggcagaagccatgtggcggtg 601
Query: 61 ttttggaagctcgggcggtgaccttgcaggctgaccttactcttaatctatcaaagagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ttttggaagctcgggcggtgaccttgcaggctgaccttactcttaatctatcaaagagac 541
Query: 121 caataagcattgagctgacaaccaaagcagtttggggaattttttttttcttggtagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 caataagcattgagctgacaaccaaagcagtttggggaattttttttttcttggtagcct 481
Query: 181 ttaggcactcagaagagaaaggagcaaaaacatgaaggcaatatggggagcaaagttacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ttaggcactcagaagagaaaggagcaaaaacatgaaggcaatatggggagcaaagttacc 421
Query: 241 acaggaacaaaatgttcttctgagcagcttgaaatgagcataattttggagaatttctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 acaggaacaaaatgttcttctgagcagcttgaaatgagcataattttggagaatttctgc 361
Query: 301 agtggcgggttaattcataattgggtttgctgagcaatcaacaatgtgttgcttgtattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agtggcgggttaattcataattgggtttgctgagcaatcaacaatgtgttgcttgtattt 301
Query: 361 tcatatgccgggaacatatgactcggcgtgtgcaggcgcgtggattataatgctccagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcatatgccgggaacatatgactcggcgtgtgcaggcgcgtggattataatgctccagta 241
Query: 421 ctttgatacctcactaatgtgcaatctctatttcttgctt 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ctttgatacctcactaatgtgcaatctctatttcttgctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
