Query= MSMg01no355_g13.b1 MSMg01no355_g13.b1 CHROMAT_FILE:
MSMg01no355_g13.b1 PHD_FILE: MSMg01no355_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:51 2005
(569 letters)
>mm_chr11_32410151_32411119
Length = 969
Score = 1093 bits (565), Expect = 0.0
Identities = 568/569 (99%)
Strand = Plus / Plus
Query: 1 tacatatttagtgcatttatatttgtatatataacaataataaaagaaaagaggtcataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacatatttagtgcatttatatttgtatatataacaataataaaagaaaagaggtcataa 260
Query: 61 tttaaggggatatggaaaggatggaaaagagggaatgatatgattctattttaattaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaaggggatatggaaaggatggaaaagagggaatgatatgattctattttaattaccc 320
Query: 121 tgctaagaggcaagaagcttggatatactgtctatgattgagtaactacttttcactgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctaagaggcaagaagcttggatatactgtctatgattgagtaactacttttcactgac 380
Query: 181 accctgtgatagcaacatatggattttgggtaaacatttccatcttccaaagtgtttaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accctgtgatagcaacatatggattttgggtaaacatttccatcttccaaagtgtttaag 440
Query: 241 taaatagctttttattttttcctgagatatgcactaagtttttttttcatttagaaatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaatagctttttattttttcctgagatatgcactaagtttttttttcatttagaaatag 500
Query: 301 actttttaatgtctaaattgcaccataatttattgaagtatgctaaaattctttattctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actttttaatgtctaaattgcaccataatttattgaagtatgctaaaattctttattctt 560
Query: 361 tgggatatacaagtgtttatcagaactctgttatttaacttttccaagtagcttaactca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgggatatacaagtgtttatcagaactctgttatttaacttttccaagtagcttaactca 620
Query: 421 cacagaaagtgtcatgcatgctgatgctataaaaatgtgtgtattgggggtcttgcagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacagaaagtgtcatgcatgctgatgctataaaaatgtgtgtattgggggtcttgcagac 680
Query: 481 tggtggttactctttctaaacttgtccctttctacttctttataattagtataggtcttt 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 681 tggtggttactctttctaaacttgtccctttttacttctttataattagtataggtcttt 740
Query: 541 cagatatgagtctgaatttattttgtttg 569
|||||||||||||||||||||||||||||
Sbjct: 741 cagatatgagtctgaatttattttgtttg 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_g13.g1 MSMg01no355_g13.g1 CHROMAT_FILE:
MSMg01no355_g13.g1 PHD_FILE: MSMg01no355_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:51 2005
(422 letters)
>mm_chr11_32580210_32581031
Length = 822
Score = 750 bits (388), Expect = 0.0
Identities = 410/422 (97%), Gaps = 8/422 (1%)
Strand = Plus / Minus
Query: 1 tctgctggccttggcctggaaaactgggtgggccctgaggacaggtatcagatctggcct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tctgctggccttggcctggaaaactgggtgggccctgaggacaggtatcagatctggcc- 639
Query: 61 tttttttttttttttttttttttgagttggctcaagctgatggttcccagtagcataaag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 -------ttttttttttttttttgagttggctcaagctgatggttcccagtagcataaag 586
Query: 121 ctgtggtcttcataaacctccatttgtgaggtttgcagtacagggttaagtggtgagtcc 180
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 585 ctgtggtcttcataaacctccatttgtgaggtttgcagtacagggtttagttgtgagtcc 526
Query: 181 cacccccctctttttttttaaatggaggagaaaaggtaaaccgaaagatgtttcaaaaca 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 525 cacccccctctttttttttaaatgggggagaaaaggtaaaccgaaagatgtttcaaaaca 466
Query: 241 gaaaattgttttaattatgaaaccctcttaactcaaaactgttaaaggcagccaaatggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gaaaattgttttaattatgaaaccctcttaactcaaaactgttaaaggcagccaaatggg 406
Query: 301 aaatagagtattttgttttgtttttcaaaggtttaacaattaaacaaacatgagaatcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aaatagagtattttgttttgtttttcaaaggtttaacaattaaacaaacatgagaatcac 346
Query: 361 aactttgtagtgagaggaaagaattaaagggcaggagaagaaaggggagcaagaaagggc 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aactttgtagtgaggggaaagaattaaagggcaggagaagaaaggggagcaagaaagggc 286
Query: 421 cc 422
||
Sbjct: 285 cc 284
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
