XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCATGAGTTTCTCAACTCTTAAATGGGGTTTCACAAGTGAAAATGTGAT
TTATTTTCCCACCCATCCCTCTATTTTCATTCGCATGTTTGGAATCTCTA
TTCATAATTTATAATTTTAAAAGTTAGAGGTCAATTTTCTGGAAAATATG
GAGCCAGGGTCAGAAGCAAATTCAACAATCAAGTATAATGCCATCCATAT
GTCAGTTCTAGAAAAAAATGTTTTTCAAAATTACTGTGATTTTTCTGGGT
TTTAGCCTGAACCAAGATGGTAACTGCATGTCTCTGTTCCTGCTAACTCA
CCAGAGAAATTAATGACCCCTGTCTTGGCCCTCACTCCCTATAGTGGGTG
TCACCTGCCTGTGTCCACATTATGTCTGCTACATTAGAAAGAAAAAAAAA
AAAAGCTTGGATTAGGAAGTGACTCCTAAGTGCACCCCCTTCTAGCATAC
TATTTTAACATCTACTTCCCCATCTAGCATCCTCATGAATCTACAAATCT
ACATCCTACTTGACTGCCCCAGATGAGTTCTTGCCACATCTCTCCCCATG
CCATCACTTATTCTCTGACCCTCCTCCAGAGGCCCCAGACTCTTTTGACA
TGACCCCATGACCCTCCTCATGCCATATCTTTCATAACTTGTTCTTAGAA
AAAGAGGTGTGCTGTTTGGTCATCAGACCCACACCCTTTGGAGGTGGTGA
GGGGTTCC

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTTGTTTAACCCTGTACCCCATTTTTTAA
TGGGGTTATTTGATTTTTTGGAGTCCATCGTCTTGTGTTCTTTATATTTA
TTGGATATTAGGCCCCTATCTGATTTAGGATTAGTAAAGATTTTTTTCCC
CAATCTGTTGGTGGCCTTTTTGACTTATTGACAGTGTCTTTTGCCTTATA
GAAGCTTTGCAATTTTATGAGGTCTGATTTGTCAATTCTTGATCTTACTG
CACAAGCTATTGTTGTTCTGCTCAGGAATTTTTCCCCTGTGTCCATATCT
TTGAGGCTTCTCCCTACTTTCTCCTCTATACATTTCAGTGTCTCTGGTTT
TATGTGGAGTTCCTTGATCCACTTAGACTTGAGCTTTGTACAAGGAGATA
TGAATGGATCAATTTGCATTCTTCTTCACGATAACTGCCAGTTGTGCCAG
CACCATTTGTTGAAAATGCTGTCTTTTTTCTACTGGATGGNTTTAGCTCC
TTTGTCAAAATTCAGGGACCTCATTTGGGGGGTTCATTTCTTGTTTTTTC
ATTTTAATTCCTTTCACTTCTTTGGCTGGGCCGTGCTAATTTCATTAAAC
TTTTTACTTATTTTCTTTTCAAATTTCTTGTCTTGTTCGTCACCATCCCT
AAATTTTCTCTTCTTTCTCTATCCTTCATTCCCCCTCTCCTTTGTTATCA
TTAATTT

Query= MSMg01no357_a14.b1 MSMg01no357_a14.b1 CHROMAT_FILE:
MSMg01no357_a14.b1 PHD_FILE: MSMg01no357_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:56 2005
         (526 letters)



>mm_chr11_9303953_9304878
          Length = 926

 Score =  942 bits (487), Expect = 0.0
 Identities = 514/523 (98%), Gaps = 2/523 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccatgagtttctcaactcttaaatggggtttcacaagtgaaaatgtgatttattt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gaattccatgagtttctcaactcttaaatggggtttcacaagtgaaaatgtgatttattt 667

                                                                       
Query: 65  tcccacccatccctctattttcattcgcatgtttggaatctctattcataatttataatt 124
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 ttccacccatccctctattttcattcgcatgtttggaatctctattcataatttataatt 607

                                                                       
Query: 125 ttaaaagttagaggtcaattttctggaaaatatggagccagggtcagaagcaaattcaac 184
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 606 ttaaaagttagaggtcaattttctggaaaatatggagccaggttcagaagcaaattcaac 547

                                                                       
Query: 185 aatcaagtataatgccatccatatgtcagttctag-aaaaaaatgtttttcaaaattact 243
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 546 aatcaagtataatgccatccatatgtcagttctagaaaaaaaatgtttttcaaaattact 487

                                                                       
Query: 244 gtgatttttctgggttttagcctgaaccaagatggtaactgcatgtctctgttcctgcta 303
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtaatttttctgggttttagcctgaaccaagatggtaactgcatgtctctgttcctgcta 427

                                                                       
Query: 304 actcaccagagaaattaatgacccctgtcttggccctcactccctatagtgggtgtcacc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 actcaccagagaaattaatgacccctgtcttggccctcactccctatagtgggtgtcacc 367

                                                                       
Query: 364 tgcctgtgtccacattatgtctgctacattagaaagaaaaaaaaaaaaagcttggattag 423
           ||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 366 tgcctgtctccacattgtgtctgctacattagaaa-aaaaaaaaaaaaagcttggcttag 308

                                                                       
Query: 424 gaagtgactcctaagtgcacccccttctagcatactattttaacatctacttccccatct 483
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 307 gaagtgactcctaagtgcacccccttctagcacactattttaacatctacttccccatct 248

                                                      
Query: 484 agcatcctcatgaatctacaaatctacatcctacttgactgcc 526
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agcatcctcatgaatctacaaatctacatcctacttgactgcc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space:   472656
Effective search space used:   472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)