Query= MSMg01no357_o24.b1 MSMg01no357_o24.b1 CHROMAT_FILE:
MSMg01no357_o24.b1 PHD_FILE: MSMg01no357_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:04 2005
(520 letters)
>mm_chr11_66244480_66245399
Length = 920
Score = 982 bits (508), Expect = 0.0
Identities = 514/516 (99%), Gaps = 1/516 (0%)
Strand = Plus / Plus
Query: 5 ggaattcattttctaacgtatgcattttgagagagccacactaggacagtaacagtgact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcattttctaacgtatgcattttgagagagccacactaggacagtaacagtgact 264
Query: 65 ccagcagactccatgtatctttaggtaaagtactcgatgaacaaactcaaaaagaaacct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccagcagactccatgtatctttaggtaaagtactcgatgaacaaactcaaaaagaaacct 324
Query: 125 gccattttgcacttgaatcaatacatttataaataagtcaaattcatttatagtgaacca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gccattttgcacttgaatcaatacatttataaataagtcaaattcatttatagtgaacca 384
Query: 185 aatatattgagctggcatttttcagaaaagaagaacgtattgaactttaattaataaaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatatattgagctggcatttttcagaaaagaagaacgtattgaactttaattaataaaac 444
Query: 245 taagtttttaattctagtgttattgtagagggataacaggtcagtatctttagtcctaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taagtttttaattctagtgttattgtagagggataacaggtcagtatctttagtcctaac 504
Query: 305 aatgatttctattgggctaactacctggaggttactataacttctagacaaacatagtaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatgatttctattgggctaactacctggaggttactataacttctagacaaacatagtaa 564
Query: 365 aataaaagctaaattatttgaaaacagtatatagggaaagatcaaaagtaggcagaaact 424
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aataaaagttaaattatttgaaaacagtatatagggaaagatcaaaagtaggcagaaact 624
Query: 425 ggaagggtcaactcttgaataaagagaaccatatctggttaaatatgaatttatatagtg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggaagggtcaactcttgaataaagagaaccatatctggttaaatatgaatttatatagtg 684
Query: 485 tgtctcaacagaaaaatcatacaacacgttttctgt 520
||||||||||||||||||||||||||||||| ||||
Sbjct: 685 tgtctcaacagaaaaatcatacaacacgttt-ctgt 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 920
Length adjustment: 10
Effective length of query: 510
Effective length of database: 910
Effective search space: 464100
Effective search space used: 464100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_o24.g1 MSMg01no357_o24.g1 CHROMAT_FILE:
MSMg01no357_o24.g1 PHD_FILE: MSMg01no357_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:04 2005
(312 letters)
>mm_chr11_66381602_66382316
Length = 715
Score = 559 bits (289), Expect = e-164
Identities = 307/315 (97%), Gaps = 5/315 (1%)
Strand = Plus / Minus
Query: 1 caggaggttccctagcatccacaaccctggccaatgcaaaacaaggggggattagaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 caggaggttccctagcatccacaaccctggccaatgcaaaacaaggggggattagaagag 455
Query: 61 ggctggcattgcgaacttgcatgcctgccaacaattccacacagttggggtt----gggg 116
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 454 ggctggcattgcgaacttgcatgcctgccaacaattccacacagttggggttggaggggg 395
Query: 117 ggggcactctgctggaaactagcatttcatttgcagcttcatttgcagtaaaaaaagttg 176
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 394 ggggcactctgctggaaactagcatttcatttgcagcttcatttgcagt-agaaaagttg 336
Query: 177 ctatgtgtaataatgtcagccactgacagttgggaatcagtggctcctggagcaagccac 236
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 335 ctatgtgtaataatgtcagccactgacagttgggaatcagtggctcctggagcgagccac 276
Query: 237 caccacacaagtaattttcactttgcaagtcagaatgaccctgggagctaggtgctggag 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 caccacacaagtaattttcactttgcaagtcagaatgaccctgggagctaggtgctggag 216
Query: 297 ggggaggggagtgtg 311
||||||||||||||
Sbjct: 215 tgggaggggagtgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 715
Length adjustment: 9
Effective length of query: 303
Effective length of database: 706
Effective search space: 213918
Effective search space used: 213918
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
