Query= MSMg01no358_k24.b1 MSMg01no358_k24.b1 CHROMAT_FILE:
MSMg01no358_k24.b1 PHD_FILE: MSMg01no358_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:01 2005
(391 letters)
>mm_chr11_50534083_50534876
Length = 794
Score = 716 bits (370), Expect = 0.0
Identities = 384/390 (98%), Gaps = 3/390 (0%)
Strand = Plus / Plus
Query: 5 gaattccagtgatcccaatgagtccaagacatcgaaaaggcagcagtgaggcctgtccaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtgatcccaatgagtccaagacatcgaaaaggcagcagtgaggcctgtccaa 264
Query: 65 gggtcgcgcgatatggccattcataaaagcatgtctctgctt---ctgcgggtgccacag 121
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 gggtcgcgcaatatggccattcataaaagcatgtctctgcttctcctgcgggtgccacag 324
Query: 122 tgccaacctcagtttcacgctggctaaaatcaggtggggctgactgtgcctctgggtcac 181
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 tgccaacctcagtttcacgctggctaaaatcaggtggggctgacggtgcctctgggtcac 384
Query: 182 tgcagtttggttctgagacaatgtctaaaccaaagccagaggcgctcatgcctgcagctg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgcagtttggttctgagacaatgtctaaaccaaagccagaggcgctcatgcctgcagctg 444
Query: 242 cctgttgtccactggggccaaagacagttgctgcctcagagtgacctgtcagtctctgag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cctgttgtccactggggccaaagacagttgctgcctcagagtgacctgtcagtctctgag 504
Query: 302 gtcagtactgctgctggagtcagacagggctgtcctgcactgctggcccctgcggtatct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtcagtactgctgctggagtcagacagggctgtcctgcactgctggcccctgcggtatct 564
Query: 362 gctaggcttatttctacatctgtccgacag 391
||||||||| ||||||||||||||||||||
Sbjct: 565 gctaggcttgtttctacatctgtccgacag 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 794
Length adjustment: 9
Effective length of query: 382
Effective length of database: 785
Effective search space: 299870
Effective search space used: 299870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_k24.g1 MSMg01no358_k24.g1 CHROMAT_FILE:
MSMg01no358_k24.g1 PHD_FILE: MSMg01no358_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:01 2005
(367 letters)
>mm_chr11_50590982_50591748
Length = 767
Score = 702 bits (363), Expect = 0.0
Identities = 366/367 (99%)
Strand = Plus / Minus
Query: 1 acaggcaaggagggacactggactgaatgtttgtgtcccctcaaattcaagtggtaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 acaggcaaggagggacactggactgaatgtttgtgtcccctcaaattcaagtggtaaagc 611
Query: 61 cttaatccctgtgtgatggtgtaggaatgtggagatctttaagtcactgtcctcatcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cttaatccctgtgtgatggtgtaggaatgtggagatctttaagtcactgtcctcatcaca 551
Query: 121 agggataagagaaattctttcactcacaggacacccattgttggctgtgtagcttcaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 agggataagagaaattctttcactcacaggacacccattgttggctgtgtagcttcaaac 491
Query: 181 tgggctgaaccctgtaggggaagggatcctggcttaagctcatctgcatatgccagggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgggctgaaccctgtaggggaagggatcctggcttaagctcatctgcatatgccagggcc 431
Query: 241 ctagaaaaatgattggctaaggagtcagcatattctttcacttgaaccaatgagaaccgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ctagaaaaatgattggctaaggagtcagcatattctttcacttgaaccaatgagaaccgg 371
Query: 301 gcctggactcttggctgggcaaacaggaatctttctactgatttatggggagggtaggtg 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gcctggactcttgactgggcaaacaggaatctttctactgatttatggggagggtaggtg 311
Query: 361 gctaagc 367
|||||||
Sbjct: 310 gctaagc 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
