Query= MSMg01no361_e16.b1 MSMg01no361_e16.b1 CHROMAT_FILE:
MSMg01no361_e16.b1 PHD_FILE: MSMg01no361_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:17 2005
(602 letters)
>mm_chr11_33875490_33876491
Length = 1002
Score = 1127 bits (583), Expect = 0.0
Identities = 595/599 (99%), Gaps = 1/599 (0%)
Strand = Plus / Plus
Query: 5 gaattctctgtgtc-ccaggaagaacactagtgtggaacagccaggacccttgatgaagc 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctctgtgtcaccaggaagaacactagtgtggaacagccaggacccttgatgaagc 263
Query: 64 tcctggccccattggagctctgcgtgctacactgcaccactacatgcctcactcagatct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcctggccccattggagctctgcgtgctacactgcaccactacatgcctcactcagatct 323
Query: 124 cacttcccaatggaagttggaaacacattcaaacagagttgggtcttgtgagccccactc 183
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 324 cacttcccaatggaagttggaaacacattcaatcagagttgggtcttgtgagccccactc 383
Query: 184 tgtgaccatcacaccaagaatgggtaggcagcattcattttcagtctctgggggcatcct 243
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtgaccatcgcaccaagaatgggtaggcagcattcattttcagtctctgggggcatcct 443
Query: 244 ttcgagggcttgttctcattcttatatttctggagctaagtgcacctcatttgtagggcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttcgagggcttgttctcattcttatatttctggagctaagtgcacctcatttgtagggcc 503
Query: 304 ctcgattctaagtttgcatttgtctttggtgataactcttgaaggaaagacatttttgaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctcgattctaagtttgcatttgtctttggtgataactcttgaaggaaagacatttttgaa 563
Query: 364 aaatcaagagtccaaattggcttgtctatgacctcaggcagttcatttaacttccccgag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaatcaagagtccaaattggcttgtctatgacctcaggcagttcatttaacttccccgag 623
Query: 424 gctcactctcctcaactgggaaatgaaagaaacttcatttgttttatagggcgattagga 483
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 624 gctcactctcctcaactgggaaatgagagaaacttcatttgttttatagggcgattagga 683
Query: 484 tgattgagtgcaaatagtcagccaggatgcctggtgcattgaagatgttctgcaaacgtt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgattgagtgcaaatagtcagccaggatgcctggtgcattgaagatgttctgcaaacgtt 743
Query: 544 tgctttgttctagcaagccagcctccacactccaaccatgcagattattttctgttgag 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgctttgttctagcaagccagcctccacactccaaccatgcagattattttctgttgag 802
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_e16.g1 MSMg01no361_e16.g1 CHROMAT_FILE:
MSMg01no361_e16.g1 PHD_FILE: MSMg01no361_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:17 2005
(510 letters)
>mm_chr11_34070962_34071871
Length = 910
Score = 959 bits (496), Expect = 0.0
Identities = 506/510 (99%), Gaps = 2/510 (0%)
Strand = Plus / Minus
Query: 1 cttggtagccaggcactcattaccaaaggatcaaagtgccaaaggaagctactcatttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttggtagccaggcactcattaccaaaggatcaaagtgccaaaggaagctactcatttga 506
Query: 61 ggctaagacttggatttttcattttcataattggtccttgaatttgcacaatagaagggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggctaagacttggatttttcattttcataattggtccttgaatttgcacaatagaagggg 446
Query: 121 tctattggacaaagtgtctctatggcagctcagtggcccatgggggagggtggggccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctattggacaaagtgtctctatggcagctcagtggcccatgggggagggtggggccagt 386
Query: 181 gcctgcaagacctagatggcttcccagaaagcttctgaaggccatttgtccatctgctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcctgcaagacctagatggcttcccagaaagcttctgaaggccatttgtccatctgctgc 326
Query: 241 agctggtcagcacctaggccaaaaggagaggtctgtcccaagcactaaaaactgtcagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agctggtcagcacctaggccaaaaggagaggtctgtcccaagcactaaaaactgtcagca 266
Query: 301 gagccaaaggcttgttgtctccttcagactgtcccagctatctgcccagctatctggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagccaaaggcttgttgtctccttcagactgtcccagctatctgcccagctatctggaag 206
Query: 361 ctcttgggtgatgttaccaaggacatttagtaatatctggagatttttttttgcttggca 420
|||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 205 ctcttgggtgatgttaccaaggacatttagtaatatctggagatatttgt--gcttggca 148
Query: 421 cactgggaactgaaagcacttgccttccctgacatggaacacttgctttccccactttca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cactgggaactgaaagcacttgccttccctgacatggaacacttgctttccccactttca 88
Query: 481 caggttgaaatcctggtccccaatgtgcta 510
||||||||||||||||||||||||||||||
Sbjct: 87 caggttgaaatcctggtccccaatgtgcta 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space: 450000
Effective search space used: 450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
