Query= MSMg01no361_k05.b1 MSMg01no361_k05.b1 CHROMAT_FILE:
MSMg01no361_k05.b1 PHD_FILE: MSMg01no361_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:44 2005
(455 letters)
>mm_chr11_114857087_114857939
Length = 853
Score = 808 bits (418), Expect = 0.0
Identities = 443/452 (98%), Gaps = 2/452 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttctcctccctccctgccttagggtgggatgagggtgttatatagggctgag 63
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 653 ggaattctttcttctccctccctgccttagagtgggatgagggtgttatatagggctgag 594
Query: 64 aactggatggtcacttacaccacagcagaaggaagtatttccaaccgagggcagtgccaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 aactggatggtcacttacaccacagcagaaggaagtatttccaaccgagggcagtgccaa 534
Query: 124 ttaaaggtatagaggtaaatattgagaaggcaatttgacagcttgtacagtaaatatgta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ttaaaggtatagaggtaaatattgagaaggcaatttgacagcttgtacagtaaatatgta 474
Query: 184 gcccttccatgagaaatactcatgacactgtgacctctagattcagtcatagaaggtggg 243
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 473 gcccttccatgagaaatactcatgacactgtgacctccagattcagtcacagaaggtggg 414
Query: 244 ctatactggtgatctctctgtctgatggtacatccctgcttcccagccaccttggtgaca 303
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 413 ctatactggtgatctctctgtctgatggcacatccctgcttcccagtcaccttggtgaca 354
Query: 304 acctgaacctagcatttcatacccactaagtttaagtctttgccacatgtatgctcatgg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 acctgaacctagcatttcatacccactaagtttaagtctttgccacatgtatgctcatgg 294
Query: 364 gctggccaagggtgtattgcttagctttcctgtgtctaattgttatataaacagagttat 423
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 293 gctggccaagggtgtattgcttagctttcctgtgtctgattgttatataaacagagttat 234
Query: 424 actttttttttttctaaatagggtcttactgt 455
|| ||||||||||||||||||||||||||||
Sbjct: 233 ac--tttttttttctaaatagggtcttactgt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 853
Length adjustment: 10
Effective length of query: 445
Effective length of database: 843
Effective search space: 375135
Effective search space used: 375135
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_k05.g1 MSMg01no361_k05.g1 CHROMAT_FILE:
MSMg01no361_k05.g1 PHD_FILE: MSMg01no361_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:44 2005
(309 letters)
>mm_chr11_114674766_114675474
Length = 709
Score = 489 bits (253), Expect = e-143
Identities = 295/317 (93%), Gaps = 16/317 (5%)
Strand = Plus / Plus
Query: 1 atgtagttccttgtgtgggcaagcttgtaggcagactgaagcagaaggaaaggtagtcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgtagttccttgtgtgggcaagcttgtaggcagactgaagcagaaggaaaggtagtcca 260
Query: 61 ctggggacctggtgatggcatatccatcccctctgactgagacctctccccggagtcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggggacctggtgatggcatatccatcccctctgactgagacctctccccggagtcccc 320
Query: 121 agattctattcaaagagcctagaaggctggagatggtgcctgcctataagct------ta 174
|||||||||||||||||||||||||||||||||||||| | | | | |
Sbjct: 321 agattctattcaaagagcctagaaggctggagatggtgacggg------ggtggggggtg 374
Query: 175 ggacggggg--ggggggtggtctgagacagagtttgagaactgcatgggctatggaatga 232
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gg--gggggtgggggggtggtctgagacagagtttgagaactgcatgggctatggaatga 432
Query: 233 gtttgaagccagtttgaacaatacacaaaggccttggctcagacaatagatagatagata 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gtttgaagccagtttgaacaatacacaaaggccttggctcagacaatagatagatagata 492
Query: 293 agactgacagatggaca 309
|||| ||||||||||||
Sbjct: 493 agacagacagatggaca 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
