Query= MSMg01no370_m16.b1 MSMg01no370_m16.b1 CHROMAT_FILE:
MSMg01no370_m16.b1 PHD_FILE: MSMg01no370_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:57 2005
(440 letters)
>mm_chr11_69838536_69839371
Length = 836
Score = 781 bits (404), Expect = 0.0
Identities = 425/436 (97%), Gaps = 8/436 (1%)
Strand = Plus / Minus
Query: 5 gaattccaggccagcctgatcttatagaaagttccagaccaagtagggttacatatcaag 64
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gaattccaggccagcctgatcgtatagaaagttccagaccaagtagggttacatatcaag 447
Query: 65 acgctgtctcaataaataaataaaataaacaaataaaaacattcttcgtgtttgaagagc 124
|||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 446 acgctgtctc----aataaataaaataagcaaataaaaacactcttcgtgtttgaagagc 391
Query: 125 tttaaagaagggaaacaggactcaccaaatatggatcacagatttagagaacgctaaact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tttaaagaagggaaacaggactcaccaaatatggatcacagatttagagaacgctaaact 331
Query: 185 cagtaagtgtcagtagcatggggaaggagaatagagaggagagaatccggcttggtagta 244
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 c----agtgtcagtagcatggggaaggagaatagagaggagagaatccggcttggtagta 275
Query: 245 tatgcataaatttctctgtgctctggaagcagaggcagagggctgagaagttcaaggtca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tatgcataaatttctctgtgctctggaagcagaggcagagggctgagaagttcaaggtca 215
Query: 305 cccacggctacatattgagttcaggaccagccagaaccctattttaaccctcttctgccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 cccacggctacatattgagttcaggaccagccagaaccctattttaaccctcttctgccc 155
Query: 365 caaaagaaaaagaggaaggaaggtaaggagagaacaggcataatagcccttctcgaaggc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 caaaagaaaaagaggaaggaaggtaaggagagaacaggcataatagcccttctcgaaggc 95
Query: 425 tgagctgtggaggact 440
||||||||||||||||
Sbjct: 94 tgagctgtggaggact 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 836
Length adjustment: 9
Effective length of query: 431
Effective length of database: 827
Effective search space: 356437
Effective search space used: 356437
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_m16.g1 MSMg01no370_m16.g1 CHROMAT_FILE:
MSMg01no370_m16.g1 PHD_FILE: MSMg01no370_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:57 2005
(358 letters)
>mm_chr11_69689418_69690175
Length = 758
Score = 669 bits (346), Expect = 0.0
Identities = 355/358 (99%)
Strand = Plus / Plus
Query: 1 ccatcccatctgcctgcccaagttgcagatggagtcagacaggaatggaaggcatcacac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ccatcccatctgcctgcccaagttgcagatggagtcagacaggaatggaaagcatcacac 260
Query: 61 agcagatttacacaggcccagaaggagggggaggtccaggctgcacaatattaatacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcagatttacacaggcccagaaggagggggaggtccaggctgcacaatattaatacaat 320
Query: 121 ggagggactgtatgccagcgggttgactgatgtggtctcaccccagagggagagagtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagggactgtatgccagcgggttgactgatgtggtctcaccccagagggagagagtttt 380
Query: 181 ccagaaccctcattcccggattccggatcagtcattggagggcctagagcaacatctaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagaaccctcattcccggattccggatcagtcattggagggcctagagcaacatctaca 440
Query: 241 ggccaacagtcccccgctttctgggaatggacagaggggatgtgggcgtggtggtggtaa 300
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 441 ggccaacagtcccccgctttccgggaatggacagaggggatgtgggagtggtggtggtaa 500
Query: 301 gcgattctttccttctgtagataatttcctggcatcatctgctgctctgtttgattgg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcgattctttccttctgtagataatttcctggcatcatctgctgctctgtttgattgg 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
