Query= MSMg01no372_n23.b1 MSMg01no372_n23.b1 CHROMAT_FILE:
MSMg01no372_n23.b1 PHD_FILE: MSMg01no372_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:43 2005
(374 letters)
>mm_chr11_81630008_81630781
Length = 774
Score = 671 bits (347), Expect = 0.0
Identities = 368/375 (98%), Gaps = 2/375 (0%)
Strand = Plus / Minus
Query: 1 acaagaactggatcatgcacaagtaaatgggat-caagggccccatgaaaagggatgtat 59
||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| |||
Sbjct: 574 acaagaactggatcatgcacaagtaaatgggatac-aggaccccatgaaaagggacgtac 516
Query: 60 ggttctctggatgcttaaggagaccctaaggaagagaagggaggcagagaccagctctca 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggttctctggctgcttaaggagaccctaaggaagagaagggaggcagagaccagctctca 456
Query: 120 cagagtctcaaccaagagcccccagggtgaagggctcaggtccgactcgactcaatccct 179
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 455 cagagtctcaaccaagagcccccagggtgaagggctcaggtccaactcgactcaatccct 396
Query: 180 ctcctccagcagctgagtgagctgtccccttcagtcagaaccagcagcacaagtcacaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ctcctccagcagctgagtgagctgtccccttcagtcagaaccagcagcacaagtcacaag 336
Query: 240 gtgaccctcaggtccattaagaaaccaggcaacactgatatccctcagtagctgtctcca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gtgaccctcaggtccattaagaaaccaggcaacactgatatccctcagtagctgtctcca 276
Query: 300 gcctccttgcccaggaaacaggcccagttaattgcagggtgatcgccatgttcttgcaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gcctccttgcccaggaaacaggcccagttaattgcagggtgatcgccatgttcttgcaga 216
Query: 360 gcatttaacgtagcg 374
|||||||||||||||
Sbjct: 215 gcatttaacgtagcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_n23.g1 MSMg01no372_n23.g1 CHROMAT_FILE:
MSMg01no372_n23.g1 PHD_FILE: MSMg01no372_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:43 2005
(455 letters)
>mm_chr11_81471564_81472418
Length = 855
Score = 795 bits (411), Expect = 0.0
Identities = 443/463 (95%), Gaps = 16/463 (3%)
Strand = Plus / Plus
Query: 1 agtgagtgttaacgtccctgactgacaggtgcaccgaatgactggcttcctcttgtcatc 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 agtgagtgttaacgcccctgactgacaggtgcaccgaatgactggcttcctcttgtcatc 252
Query: 61 gtttttccagctcttggatggcatagtgaaggacctggaaaccaacaaccaggcaggaga 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 253 gtttttccagctcttggatggcatagtgaaggacctggaaaccaacgaccaggcaggaga 312
Query: 121 aagaacactgttccttgtatttggaaagcatagaagtgaacacattaaagcctcctgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aagaacactgttccttgtatttggaaagcatagaagtgaacacattaaagcctcctgcag 372
Query: 181 gcctgtggaggaaaagcctgtctcacttttcccatcaatgcttcttatgctcaggagacc 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gcctgtggagaaaaagcctgtctcacttttcccatcaatgcttcttatgctcaggagacc 432
Query: 241 acgaaactca--------atgtcacacccacagcatcccttgcagctagtattgtatgga 292
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 acgaaactcatttgtacaatgtcacacccacagcatcccttgcagctagtattgtatgga 492
Query: 293 aattcccctgcagctagtattgcatggaacattctttgaaaaatacttattttgctcaaa 352
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 acttcccctgcagctagtattgcatggaacattctttgaaaaatacttattttgctcaaa 552
Query: 353 gtctccactctgttttacacacacacacacacacacacacacacacacacacacacccat 412
|||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gtctccactctgtt--------acacacacacacacacacacacacacacacacacccat 604
Query: 413 acacataaacttgtttgcacatagcaaccaagagatcttccat 455
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 acacataaacttgtttgcacatagcaaccaagagatcttccat 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
