Query= MSMg01no375_d07.b1 MSMg01no375_d07.b1 CHROMAT_FILE:
MSMg01no375_d07.b1 PHD_FILE: MSMg01no375_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:43 2005
(465 letters)
>mm_chr11_3676982_3677851
Length = 870
Score = 855 bits (442), Expect = 0.0
Identities = 458/466 (98%), Gaps = 5/466 (1%)
Strand = Plus / Minus
Query: 5 gaattcaggtcctcctgcctggacagccagcactttactactcagttgccgtcactgtcc 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 670 gaattcaggtcctcctgcctggacagccagcactctactactcagttgccgtcactgtcc 611
Query: 65 tcaaggcactgggttttaaaagctgaaagacatggcagaaatcagccaaccttaagtcgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tcaaggcactgggttttaaaagctgaaagacatggcagaaatcagccaaccttaagtcgt 551
Query: 125 catcttacacagatgtgcactgaggtacagagagcctgacgacctatcatgtcacttgtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 catcttacacagatgtgcactgaggtacagagagcctgacgacctatcatgtcacttgtg 491
Query: 185 actcttttcaagctccggctgacgggtctgttcctagaggagcagcgcgtcagttacaat 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 490 actcttttcaagctccggctgacgggtctgttcctagaggagcagcgcatcagttacaat 431
Query: 245 gtgatgatgtcacgaaggccttttcaattctacagaaaatgcatgtggctcgcgaggcat 304
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 430 gtgatgatgtcacgaaggccttttcaattctacagaaaatgcatgtggctcacgaggcat 371
Query: 305 aactcaggtgcaggcag-----acgtcttgcgggtcttctttgctatggcattttgtttg 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aactcaggtgcaggcagctattacgtcttgcgggtcttctttgctatggcattttgtttg 311
Query: 360 tagttactcaaaggaataccttctcgcggccttttaagcaccctggagagggccaagttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tagttactcaaaggaataccttctcgcggccttttaagcaccctggagagggccaagttc 251
Query: 420 tgtgtgctttctgtaagctgagaggatcttttttccctgcctacca 465
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tgtgtgctttctgtaagctgagaggatcttttttccctgcctacca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 870
Length adjustment: 10
Effective length of query: 455
Effective length of database: 860
Effective search space: 391300
Effective search space used: 391300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_d07.g1 MSMg01no375_d07.g1 CHROMAT_FILE:
MSMg01no375_d07.g1 PHD_FILE: MSMg01no375_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:43 2005
(378 letters)
>mm_chr11_3538711_3539492
Length = 782
Score = 712 bits (368), Expect = 0.0
Identities = 377/382 (98%), Gaps = 4/382 (1%)
Strand = Plus / Plus
Query: 1 catgttctgatgagccacccatactatagtcccttgatagattcagcctagtggcaccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgttctgatgagccacccatactatagtcccttgatagattcagcctagtggcaccag 260
Query: 61 gtgtttgtgttgtctactcttgtgttcacataacaaaagtgtctaacaaagcatttctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtttgtgttgtctactcttgtgttcacataacaaaagtgtctaacaaagcatttctca 320
Query: 121 agatatgtgcctgttgttacaagacacacaactgttagtatagttaacctataggaatct 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatatatgcctgttgttacaagacacacaactgttagtatagttaacctataggaatct 380
Query: 181 tgtgtatgggcgtagtaattgggagtctttcttttacttatgttggagatgtgtcttagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgtatgggcgtagtaattgggagtctttcttttacttatgttggagatgtgtcttagt 440
Query: 241 ctaacaaatcctgtagagatttgttttatataga----ccattctctttgtcttctaggg 296
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 ctaacaaatcctgtagagatttgttttatatagatagaccattctctttgtcttctaggg 500
Query: 297 atcctgttttaagaatgcctactggttttcttttggttaatcatgttacttttagaagat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcctgttttaagaatgcctactggttttcttttggttaatcatgttacttttagaagat 560
Query: 357 tttagataagctttggtttaag 378
||||||||||||||||||||||
Sbjct: 561 tttagataagctttggtttaag 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 782
Length adjustment: 9
Effective length of query: 369
Effective length of database: 773
Effective search space: 285237
Effective search space used: 285237
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
