Query= MSMg01no377_d09.b1 MSMg01no377_d09.b1 CHROMAT_FILE:
MSMg01no377_d09.b1 PHD_FILE: MSMg01no377_d09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:19 2005
(352 letters)
>mm_chr11_87345209_87345960
Length = 752
Score = 609 bits (315), Expect = e-179
Identities = 341/351 (97%), Gaps = 3/351 (0%)
Strand = Plus / Plus
Query: 5 gaattcagtctgtgtgctttgaaaagacaaaataacatttgtttccagaaataactgtta 64
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaatacagtcagtgtgctttgaaaagacaaaataacatttgtttccagaaataactgtta 264
Query: 65 catgcaaaaagctggtaaatagcttggttgtattttgagtgttggaatatagttctcatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catgcaaaaagctggtaaatagcttggttgtattttgagtgttggaatatagttctcatt 324
Query: 125 gagttcacacatataccatggcacacgtgtggaaacccgaagacaacttttagtcgggtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagttcacacatataccatggcacacgtgtggaaacccgaagacaacttttagtcgggtt 384
Query: 185 ctctccagagacctaagttaggctgttaaacttgtgagcacgagcttctgcttaaagtcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 ctctccagagacctaagttaggctgttaaacttgtgagcacgagcttctgcttaaagccc 444
Query: 245 accccagatgatgat---cgtcgtcttcatcatcatcatctattgatttattttttggga 301
| ||||||||||||| ||||||| || |||||||||||||||||||||||||||||||
Sbjct: 445 aacccagatgatgattgtcgtcgtcgtcgtcatcatcatctattgatttattttttggga 504
Query: 302 cagggtctcactatgtagctctggttgtcctggaactcacaatgtacacca 352
|||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 505 cagggtctcactatgtagctctggttgtcctggaactcacaatgtaaacca 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_d09.g1 MSMg01no377_d09.g1 CHROMAT_FILE:
MSMg01no377_d09.g1 PHD_FILE: MSMg01no377_d09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:19 2005
(498 letters)
>mm_chr11_87518016_87518914
Length = 899
Score = 762 bits (394), Expect = 0.0
Identities = 412/418 (98%), Gaps = 1/418 (0%)
Strand = Plus / Minus
Query: 82 caaaccaaaccaaaccaaaccagcaataaacaaacaaacaaaaacaaaagaaag-aaaag 140
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 721 caaaccaaaccaaaccaaaccagcaataaacaaacaaacaaaaacaaaagaaagaaaaag 662
Query: 141 aagaaatgaatgaaatccaaggaaaccagcgtatctatttaaatgtgccagaagctcatc 200
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 661 aagaaatgaatgaaatccaaggaaaccagcgtatctatttaaatgtgccagaggctcatc 602
Query: 201 tgaacttccggtggcaccagtgagcagagcttccgtgctagcaggtgaaagggcttaact 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgaacttccggtggcaccagtgagcagagcttccgtgctagcaggtgaaagggcttaact 542
Query: 261 tgaactggtcaatttcacgctcattcagtgtcttccagcctcctagtctccagctccgtt 320
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttaactggtcaatttcacgctcattcagtgtcttccagcctcctagtctccagctccgtt 482
Query: 321 ccagctgctggcttctccagccagcttcctttgtagctgaaaagctcagaaggggcaggt 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccagctgctggcttctccagccagcttcctttgtagctgaaaagctcagaaggggcaggt 422
Query: 381 gctgtctccaaatggaccggtacaactaagtcctctcaggccatcgtgtagatgccatct 440
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctgtctccaaatggaccggtgcaactaagtcctctcaggccatcgtgtagatgccatct 362
Query: 441 gttgaatggggatgggtaacactctgtagttcaaacttggttgctcccagtctccctg 498
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 gttgaatggggacgggtaacactctgtggttcaaacttggttgctcccagtctccctg 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 899
Length adjustment: 10
Effective length of query: 488
Effective length of database: 889
Effective search space: 433832
Effective search space used: 433832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
