XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTTGTTCATTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGA
AGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCT
GACTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGT
CTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGT
CCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTC
AGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTC
CTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACT
TAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTT
CTACACAATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTC
TTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCAT
AGGTGTGTGGGTTCATTTCTGGGGCTTCNATTCTATTCCATTGGNCTACT
TGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTA
ATAAAGCTTTAAGTCTGGCATTGGGATTCCGCCACGAATTCTTTTATCTT
TGAAAAGAATTTTTGTTATCCAAGGTTTTTTGTTTTTCCCAACAAATTTG
AAAAAGGCGCCTCCCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAATCACTTGTGAGAATAGAGAAGAACAAATA
TAAGAAATCCAGGATTGGTGAAATACCTACACAGGTAAAGGTACCTGCAG
ACAAGCCTGATGACCTGTGTTCAAATCCCAGGACTCACACAGTGGAAAGA
GAGAACTGATTTCCACCAGTTGTTGTTTGACACACACACACACACACACA
CACACACACACACACACATACACACACACAAATGTAAATTAAATTTTTGT
AAATGAATTTAAAATATTAAGCTTCATTTATATTGAGGGGAAAATAACTA
AATATGTAAAGGTCTGGGTAAGAGGGTAGCCTAGATTATATTAAGGTTAA
GTTCATACCATTCTAATAAAAGTATTACAATAAATTCCCCCGTTGCAAAT
GTTTCCTTAGAACCTTTTATATTTTCATGAAATCTTCATCCACAGATATT
TCTGTAAATAGTTCTAATTCTACATCTATTATCTTTAGCTCAGGATTTCT
CTACAACTAACTGAAGATTTTGTTGAAGTGACATTTTAATAGCACATCTT
ATATCCCAGAGTAACTTAATCCTGTACTTCCAATAACTTACTTGTAAAAA
ATTTATTATATTTTTATAACCAAGGGTCCCGTTTTTTAATGACCTTCTCC
TTGGACCATAATATTTAAAGGGTCCTAACAAAACGGATTTTGTCTTAACA
AAAACTTTACCGGTTTTTTTAAGAN

Query= MSMg01no379_d23.g1 MSMg01no379_d23.g1 CHROMAT_FILE:
MSMg01no379_d23.g1 PHD_FILE: MSMg01no379_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:58 2005
         (486 letters)



>mm_chr11_91381130_91382015
          Length = 886

 Score =  793 bits (410), Expect = 0.0
 Identities = 474/510 (92%), Gaps = 24/510 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatcacttgtgagaatagagaagaacaaatataagaaatccaggattggtgaaataccta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 177 aatcacttgtgagaatagagaagaacaaatataagaaatccaggattggtgaaatactta 236

                                                                       
Query: 61  cacaggtaaaggtacctgcagacaagcctgatgacctgtgttcaaatcccaggactcaca 120
           |||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 237 cacaggcaaaggtacctgcagacaagcctgatgacctgagttcaaatcccaagactcaca 296

                                                                       
Query: 121 cagtggaaagagagaactgatttccaccagttgttgtttgac------------------ 162
           ||||||||||||||||||||||||||||||||||||||||||                  
Sbjct: 297 cagtggaaagagagaactgatttccaccagttgttgtttgacttccacatttgcaccatg 356

                                                                       
Query: 163 --acacacacacacacacacacacacacacaca----cacacatacacacacacaaatgt 216
             |||||||||||||||||||||||||||||||    |||||| ||||||||||||||||
Sbjct: 357 gaacacacacacacacacacacacacacacacaaacacacacacacacacacacaaatgt 416

                                                                       
Query: 217 aaattaaatttttgtaaatgaatttaaaatattaagcttcatttatattgaggggaaaat 276
           |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aaattacatttttataaatgaatttaaaatattaagcttcatttatattgaggggaaaat 476

                                                                       
Query: 277 aactaaatatgtaaaggtctgggtaagagggtagcctagattatattaaggttaagttca 336
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aactaaatacgtaaaggtctgggtaagagggtagcctagattatattaaggttaagttca 536

                                                                       
Query: 337 taccattctaataaaagtattacaataaattcccccgttgcaaatgtttccttagaacct 396
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| 
Sbjct: 537 taccattctaataaaagtattacaataaattcccacgttgcaaatgtttccttagaaccc 596

                                                                       
Query: 397 tttatattttcatgaaatcttcatccacagatatttctgtaaatagttctaattctacat 456
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 597 tttatattttcatgaaatcttcatccacagatgtttctgtaaatagttctaattatacat 656

                                         
Query: 457 ctattatctttagctcaggatttctctaca 486
           ||||||||||||||||||||||||||||||
Sbjct: 657 ctattatctttagctcaggatttctctaca 686


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space:   416976
Effective search space used:   416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)