Query= MSMg01no380_a10.b1 MSMg01no380_a10.b1 CHROMAT_FILE:
MSMg01no380_a10.b1 PHD_FILE: MSMg01no380_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:58 2005
(246 letters)
>mm_chr11_117880882_117881527
Length = 646
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%)
Strand = Plus / Plus
Query: 1 cctgaagggatcctagagggagcgtgcagccttgtctgtctgtccactgcttcctttatt 60
||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 cctgacgggatccttgagggagcgtgcagccttgtctgtctgtccactgctccctttatt 260
Query: 61 tgatacagcaatattgagtggttttggatggcagttttaaagtaagcgctggactttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgatacagcaatattgagtggttttggatggcagttttaaagtaagcgctggactttgct 320
Query: 121 cctccctcctcccgtcctgggctgggaccacctgtggtgaggccagcttcacctatctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctccctcctcccgtcctgggctgggaccacctgtggtgaggccagcttcacctatctcc 380
Query: 181 tcctgctctccctgcacagggttctggggcaagggccatagcggggcttcttccattccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctgctctccctgcacagggttctggggcaagggccatagcggggcttcttccattccc 440
Query: 241 tgctct 246
||||||
Sbjct: 441 tgctct 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no380_a10.g1 MSMg01no380_a10.g1 CHROMAT_FILE:
MSMg01no380_a10.g1 PHD_FILE: MSMg01no380_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:58 2005
(366 letters)
>mm_chr11_118100190_118100955
Length = 766
Score = 600 bits (310), Expect = e-176
Identities = 347/366 (94%), Gaps = 15/366 (4%)
Strand = Plus / Minus
Query: 1 tggtggtttcagccctgagcagacacccttgtcatctaaagtcatcatggtagctcacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tggtggtttcagccctgagcagacacccttgtcatctaaagtcatcatggtagctcacgc 303
Query: 61 ctttccgtcctggagtccctcacacacacgaacaactttccttttgtcgttcttcattga 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctctccgtcctggagtccctcacacacacgaacaactttccttttgtcgttcttcattga 243
Query: 121 ccatcccaggtattcaggcttgaaaccatgagatcctcattatctctctctctctctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccatcccaggtattcaggcttgaaaccatgagatcctcattatctctctctctctctccc 183
Query: 181 tccctccctctctctttctctctctctctctctttctctctctctctctctctctctctc 240
|||||| ||||||||||||||||||||||| |||||||||||||||||| ||| |
Sbjct: 182 tccctc----tctctttctctctctctctctct--ctctctctctctctctctttct-t- 131
Query: 241 tctctcttcctttctcttttcctctctccccttctctctctttctctgtctttctctccc 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 130 ----tcttcctttctcttttcctctctccccttttctctctttctctgtctttctctccc 75
Query: 301 cccctcccctttctggtgtcatcttcagggtgctgaagtcctttgagttagactggtctc 360
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 74 ccccgcccctttctggtgtcatcttcagggtg---aagtcctttgagttagactggtctc 18
Query: 361 tcactg 366
||||||
Sbjct: 17 tcactg 12
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space: 270249
Effective search space used: 270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
