XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTTTGGTTGCCCCTCCAACATGATGCTCTAAGAGAACCACATGCCTCTCT
TTTCCCCTACTGCCTTGCTAGTATTTCTAGTCTTTTTTGACAAGGGACAA
GGTTCAAAATTCGGCAGTCTTTTTTTTTTTTCTATAGCAGAGCATGCCTT
TCTCTGAAAGGTAGCCATAAAATTTAAGCTACTGCTATGTCACCTGTCTT
CTGCATAAGAAGTGGTCATCAAGCAGTTATGACTCATTCCAGAAGGGTCC
CATCCAGTATCAAGTAAGAAAAAATGATACAAACACAGTATTGGGATGAC
TCTGTACAAACAGGACTCAATGGCTTTCTTTATTCCATTGATTTTCATTG
CTCTACATCTTTTTAAATCCAATAACACTCCACAGTACATGCACTTCCTT
CAATGAACTTAAAAATAAAAATGGATAATTTATCTTGAGCTTTTGTGTCC
TCAGTCTGAAGGCCTTACACCAGGAAGAACTATGATCTAATAAATTCATT
TCCTTCTCTGATATTCACATGCCTCTTGTTATAGAGGGGTCAACCCTGAC
CTTTATGATAAATGAGAAAAGAAATTGTACCCCTTTCCTCATATATAGTT
TATCTCATAGATAACAGTCTCTCCATATTGTTGCCAATATGAAGCCTGTC
ATAAGCCTCTATCTGCTCATGGCTTCATGGCCTGGTTCATGTCAN

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTGATCTTTCCAGAACTTTTATCATGAATGGG
TGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATCATGTG
GTTTTTGTCTTTGAGTTTGTTTATATAGTGGATTACATTGATGGATTTTC
GTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGA
TGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATT
GAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTA
TCTTTGTTGGGTCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCA
TAAAATGAGTTGGGTAGAGTACTTTTTACTTCTATCTTATGAAAAAGTTT
GTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCAC
TAAACCCGTCTGGTCCTGGGCTTTTTTTGGCTGGGAGACTATTTATAACT
GCTTCAATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAACTTGATC
CTGATTCAACTTTGGTACATGGTATCTGTCCAGAAATTTGTCCATTTCGT
CCAGTTTTTCCAGTTTTGTTGAGTATACCTTTTGTAGAAAGATCTGATGG
GGTTTTGGATTCTTCAGGAACTGTTGTATGGCCCCCTTTTCCCCG

Query= MSMg01no380_c21.b1 MSMg01no380_c21.b1 CHROMAT_FILE:
MSMg01no380_c21.b1 PHD_FILE: MSMg01no380_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:10 2005
         (574 letters)



>mm_chr11_91116932_91117902
          Length = 971

 Score =  967 bits (500), Expect = 0.0
 Identities = 556/576 (96%), Gaps = 7/576 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   acatgatgctctaagagaaccacatgcctctcttttcccctactgccttgctagtatttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 acatgatgctctaagagaaccacatgcctctcttttcccctactgccttgctagtatttc 712

                                                                       
Query: 61  tagtcttttttgacaagggacaaggttcaaaattc-ggcagtcttttttttttttctata 119
           ||||||||||||||||||||||||||||||| ||| || ||||   ||||||||||||||
Sbjct: 711 tagtcttttttgacaagggacaaggttcaaatttcagg-agtc---tttttttttctata 656

                                                                       
Query: 120 gcagagcatgcctttctctgaaaggtagccataaaatttaagctactgctatgtcacctg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gcagagcatgcctttctctgaaaggtagccataaaatttaagctactgctatgtcacctg 596

                                                                       
Query: 180 tcttctgcataagaagtggtcatcaagcagttatgactcattccagaagggtcccatcca 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tcttctgcataagaagtggtcatcaagcagttatgactcattccagaagggtcccatcca 536

                                                                       
Query: 240 gtatcaagtaagaaaaaatgatacaaacacagtattgggatgactctgtacaaacaggac 299
           |||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 535 gtatcaagtaagaagaaataatacaaacacagtattgtgatgactctgtacaaacaggac 476

                                                                       
Query: 300 tcaatggctttctttattccattgattttcattgctctacatctttttaaatccaataac 359
           ||||| |||| || ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 475 tcaatagcttcctctattccattgattttcattgctctacacctttttaaatccaataac 416

                                                                       
Query: 360 a-ctccacagtacatgcacttccttcaatgaacttaaaaataaaaatggataatttatct 418
           | || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 415 acct-cacagtacatgcacttccttcaatgaacttaaaaataaaaatgggtaatttatct 357

                                                                       
Query: 419 tgagcttttgtgtcctcagtctgaaggccttacaccaggaagaactatgatctaataaat 478
           |||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 356 tgagattttgtgtcctcagtctgaaggcctcgcaccaggaagaactatgatctaataaat 297

                                                                       
Query: 479 tcatttccttctctgatattcacatgcctcttgttatagaggggtcaaccctgaccttta 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tcatttccttctctgatattcacatgcctcttgttatagaggggtcaaccctgaccttta 237

                                               
Query: 539 tgataaatgagaaaagaaattgtacccctttcctca 574
           |||||||||||||||||||||||| |||||||||||
Sbjct: 236 tgataaatgagaaaagaaattgtatccctttcctca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 971
Length adjustment: 10
Effective length of query: 564
Effective length of database: 961
Effective search space:   542004
Effective search space used:   542004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)