XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTTGTT
ACCTTCAATAGGAACGGTATTCTGTGTGGAACAGCCTTATGTATCTGCTT
CTTTTCTTTTAGCATTGTGATTATAACAACCTTTCCTTTTGTGGAATGCA
CCTAATTTCTCTTTATACCCTAATTCATTCCATTGCAAGGATAAAGGCAT
TGGCTCATCACTTACACCAGGTGCACCATGTCTATTATGGACAATCCTGC
ATCGGGTACTCAATATACAGTGGTTTGTGTGAACAAACTAGGCTTGGTGA
GTCATGGTAATCCCTGCTTTGTCTGTTTAAGAGACAACGGTAATTTTTTT
TCCATTATGCGCCATGTAACACCTGACCAGCAACCTCATTCTAATTTTTT
CCTTGCCATTTTGAGAAAGAAGGTATAATGATTTTTGGAATTCACAGAAA
TTTCATACAGGCTATTCACAGAAATGTATTTTCTTTCACGATCGGAAAAA
TGAGCACTGTTCATTTGAATGTTCTTAAGAAAAAATAACTAGCTTCCATT
TCAGTAAGTGGGGTGCATTTCTATTCGTGCACAATAGTTGTCAAGGTTCA
CTATTTATCATCTATGGAAATTGTGATGGTAGTCCATAGNTTATGTTTGA
CTACTGATGCTCATTTCATGTAGACTCCTGTAATACTACCCTTCAAGGCT
TCATATATATCTGTTCTTATTTTTGACC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACCCCATTTTTATTGTGGT
TATTTAATTTTCTGGAGTCCAACTTCTTGAGTTCTTCATATATATTGGAT
ATTAGTCCCCTATCTGATTTAGGATTGGTAAAGATACTTGCCCACTCTGT
TGGTGGCCTTTTTGTCTTATTGACAGTATCTTGCCTTACAGAAACTTTTC
AATTTTATGAGGTCCCATTTGTTGGTTCTCAATGTTACAGCACAAGTCAT
TGCTGTTCAGTTCAGGAATATTTCCCCTGTGTCTATCCATATCTTCAAGG
CGTTTATCCACTTTCTCCTCTATAAGTTTCAGAGTCTCTGGTTTTATGTG
GTGTTCTTGATCCACTTAGACTTAAGCTTTGTACAAGGAGATAGGAATGG
ATCAATTTGTATTCTTCTTCATGATAACCATCAATTGTGCCAGCACCATT
GGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCA
AAGCTCAAGTGACCACAGGTGGTGTGGGTTCATTCCTGTGTCTTCAAATC
TATTCTATTGATCTACCTGTCTGTTGCCTTAACAGTACCATGCAGTTTTT
ATCTGAAGGTCACATTGAGGAAAGGCTGGTGACTCTGCCCAAGGTCTTTT
ATTGTTAAAAAAAGTTTTTGGAATCTAAAAATTTTGTTTTTCCAAAGAAA
TTTTAAATCGGCTTTTCTTAAAC

Query= MSMg01no381_m19.b1 MSMg01no381_m19.b1 CHROMAT_FILE:
MSMg01no381_m19.b1 PHD_FILE: MSMg01no381_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:19 2005
         (526 letters)



>mm_chr11_14498265_14499191
          Length = 927

 Score =  948 bits (490), Expect = 0.0
 Identities = 520/530 (98%), Gaps = 7/530 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aataggaacggtattctgtgtggaacagccttatgtatctgcttc-ttttcttttagcat 59
           ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 727 aataggaacggtattctgtgtggaacagccttatgtatctgcttctttttc-tttagcat 669

                                                                       
Query: 60  tgtgattataacaacctttccttttgtggaatgcacctaatttctctttataccctaatt 119
           ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 668 tgtgactataacaacctttccttttgtggaatgcacctaatttccctttataccctaatt 609

                                                                       
Query: 120 cattccattgcaaggataaaggcattggctcatcacttacaccaggtgcaccatgtctat 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 cattccattgcaaggataaaggcattggctcatcacttacaccaggtgcaccatgtctat 549

                                                                       
Query: 180 tatggacaatcctgcatcgggtactcaatatacagtggtttgtgtgaacaaactaggctt 239
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tagggacaatcctgcatcgggtactcaatatacagtggtttgtgtgaacaaactaggctt 489

                                                                       
Query: 240 ggtgagtcatggtaatccctgctttgtctgtttaagagacaacggtaatt-tttt-ttcc 297
           ||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||
Sbjct: 488 ggtgagtcatggtaatccctgctttgtctgtttaagagacaacggta-ttattttgttcc 430

                                                                       
Query: 298 attatgcgccatgtaacacctgaccagcaacctcattctaattttttccttgccattttg 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 attatgcgccatgtaacacctgaccagcaacctcattctaattttttccttgccattttg 370

                                                                       
Query: 358 agaaagaaggtataatgatttttggaattcacagaaatttcatacaggctattcacagaa 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agaaagaaggtataatgatttttggaattcacagaaatttcatacaggctattcacagaa 310

                                                                       
Query: 418 atgtattttctttcac-gatcggaaaaatgagcactgttcatttgaatgttcttaagaaa 476
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atgtattttctttcactg-tcggaaaaatgagcactgttcatttgaatgttcttaagaaa 251

                                                             
Query: 477 aaataactagcttccatttcagtaagtggggtgcatttctattcgtgcac 526
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aaataactagcttccatttcagtaagtggggtgcatttctattcgtgcac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 927
Length adjustment: 10
Effective length of query: 516
Effective length of database: 917
Effective search space:   473172
Effective search space used:   473172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)