Query= MSMg01no383_d13.b1 MSMg01no383_d13.b1 CHROMAT_FILE:
MSMg01no383_d13.b1 PHD_FILE: MSMg01no383_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:13 2005
(128 letters)
>mm_chr11_58915278_58915805
Length = 528
Score = 194 bits (100), Expect = 2e-54
Identities = 119/128 (92%), Gaps = 6/128 (4%)
Strand = Plus / Minus
Query: 4 ggaattccattccacc---gtcccatggaataggccatcccttgttttcctagggttggg 60
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 328 ggaattccattccaccaggg---catggaataggccatcccttgttttcctagggttggg 272
Query: 61 ggcttctactgagatgtctgaggttactgtaatgggtttgtcttttcaaaagttattaca 120
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 271 ggcttctactgagatgtctgaggttagtgtaatgggtttgccttttcaaaagttattaca 212
Query: 121 tttttaag 128
| ||||||
Sbjct: 211 tctttaag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 128
Length of database: 528
Length adjustment: 8
Effective length of query: 120
Effective length of database: 520
Effective search space: 62400
Effective search space used: 62400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no383_d13.g1 MSMg01no383_d13.g1 CHROMAT_FILE:
MSMg01no383_d13.g1 PHD_FILE: MSMg01no383_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:13 2005
(482 letters)
>mm_chr11_58751374_58752255
Length = 882
Score = 909 bits (470), Expect = 0.0
Identities = 476/478 (99%)
Strand = Plus / Plus
Query: 1 aaaaatagaagtcttaaggttgtatagagataaggcacagctaggccagagacctgggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaatagaagtcttaaggttgtatagagataaggcacagctaggccagagacctgggat 260
Query: 61 gaaagggggacggaggagcatgcgctagagataatagctcgagggacatagcagggtccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaagggggacggaggagcatgcgctagagataatagctcgagggacatagcagggtccg 320
Query: 121 ggagacagataatagagatgaaggaaggcagaatcacggactccaggatccaagagcccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagacagataatagagatgaaggaaggcagaatcacggactccaggatccaagagcccc 380
Query: 181 tagcatggcagggtccccggggaagggagggtgctgggcacccatgggatgcgggagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcatggcagggtccccggggaagggagggtgctgggcacccatgggatgcgggagagg 440
Query: 241 gaagaggaggtctgcacactgatcgaatgcctgactccaggtaagccacaaaggtggaca 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagaggaggtcagcacactgatcgaatgcctgactccaggtaagccacaaaggtggaca 500
Query: 301 gtgtgcaggggcccctcgcgcaccttgccgcgcagggccttcctccagcgcggttcccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgtgcaggggcccctcgcgcaccttgccgcgcagggccttcctccagcgcggttcccac 560
Query: 361 tccggcggctccgggccagcggccatgcggcaggcggagcacagcggatccccgtcggcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccggcggctccgggccagcggccatgcggcaggcggagcacagcggatccccgtcggcg 620
Query: 421 cgacagagcagctgcagcgcggcctcgctggcagggccatcgcgcgccggtgccgcgg 478
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 cgacagagcagctgcagcgcggcctcgctggcagggccatcgcgcgccggcgccgcgg 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
