Query= MSMg01no385_g13.b1 MSMg01no385_g13.b1 CHROMAT_FILE:
MSMg01no385_g13.b1 PHD_FILE: MSMg01no385_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:58 2005
(538 letters)
>mm_chr11_97678998_97679934
Length = 937
Score = 994 bits (514), Expect = 0.0
Identities = 532/538 (98%), Gaps = 1/538 (0%)
Strand = Plus / Plus
Query: 1 cctgggtgttggtattttaggtgtgagtccctactcctagattaagaaggggctgttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgggtgttggtattttaggtgtgagtccctactcctagattaagaaggggctgttttt 260
Query: 61 attacgtaggtggggtcactgaggtttggagaagccacgctgatgaaagctcaccatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attacgtaggtggggtcactgaggtttggagaagccacgctgatgaaagctcaccatctt 320
Query: 121 tcttatctagccacggccccctgactgtcagtccatccgtccggctgggactctaactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttatctagccacggccccctgactgtcagtccatccgtccggctgggactctaactcc 380
Query: 181 ttgtctctcagcaccacttgcccagcccacaggcaggcagattttgagcttagctgatgg 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtctctcaggaccacttgcccagcccacaggcaggcagattttgagcttagctgatgg 440
Query: 241 ggcctcattgttctagctggagctgttctataggactgactgcccatcacaccagctcaa 300
||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcctcagtgcac-agctggagctgttctataggactgactgcccatcacaccagctcaa 499
Query: 301 aggaggttaacccaggccggcctcaaacccctgctaatccttccaactcagcctcctggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aggaggttaacccaggccggcctcaaacccctgctaatccttccaactcagcctcctggg 559
Query: 361 ggctgggattactggtgtttgtgcgcctctgcccaaaccaggcctggtgccctggagact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggctgggattactggtgtttgtgcgcctctgcccaaaccaggcctggtgccctggagact 619
Query: 421 tcctctgcttgggctgctaagttaggtgctagcagggtagagctaataaagccaacaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcctctgcttgggctgctaagttaggtgctagcagggtagagctaataaagccaacaggt 679
Query: 481 ggtagccttgggatggtgacacactggagggtctgtgtgatcccagtcaacggggtgg 538
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggtagcctcgggatggtgacacactggagggtctgtgtgatcccagtcaacggggtgg 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 937
Length adjustment: 10
Effective length of query: 528
Effective length of database: 927
Effective search space: 489456
Effective search space used: 489456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_g13.g1 MSMg01no385_g13.g1 CHROMAT_FILE:
MSMg01no385_g13.g1 PHD_FILE: MSMg01no385_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:58 2005
(423 letters)
>mm_chr11_97916432_97917254
Length = 823
Score = 787 bits (407), Expect = 0.0
Identities = 419/423 (99%)
Strand = Plus / Minus
Query: 1 tgcagctgccattgagctggagataatagagctggaggggggagggatctaagcccccac 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgcagctgccattgagctggaggtaatagagctggaggggggagggatctaagcccccac 564
Query: 61 agcagcctgaacacctgcccgtgtcctattctaccactggcaatcgggagctctattcgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 563 agcagcctgaacacctgcccgtgtcctattctaccactggcaatcgggagctctattcct 504
Query: 121 ggacacaggagcctgagtaaggctccaagggtaatcttatccttgagaggatagccactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggacacaggagcctgagtaaggctccaagggtaatcttatccttgagaggatagccactc 444
Query: 181 tgcccttcaggcctcacatggagttggtcgcttccatcacctgagtccttgagtgccacc 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgcccttcaggcctcacatggagctggtcgcttccatcacctgagtccttgagtgccacc 384
Query: 241 accgacagcagaggaggcagcacgcatgagcccagacgtgtctccatccacacatagcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 accgacagcagaggaggcagcacgcatgagcccagacgtgtctccatccacacatagcat 324
Query: 301 ccttgatcaagccaaatcggctcagggccagaagggtgctgaaaaacagaaggcctgggg 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccttgatcaggccaaatcggctcagggccagaagggtgctgaaaaacagaaggcctgggg 264
Query: 361 aaataagtacgggtttatagccatgcattagaaggtgcacctttaggggatggagagatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aaataagtacgggtttatagccatgcattagaaggtgcacctttaggggatggagagatg 204
Query: 421 gct 423
|||
Sbjct: 203 gct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
