Query= MSMg01no386_l10.b1 MSMg01no386_l10.b1 CHROMAT_FILE:
MSMg01no386_l10.b1 PHD_FILE: MSMg01no386_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:35 2005
(245 letters)
>mm_chr11_66041587_66042230
Length = 644
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 tgcttaaggatttaataacgttaccccagataaccttgagcacagtctttggctgagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcttaaggatttaataacgttaccccagataaccttgagcacagtctttggctgagtgt 260
Query: 61 tatttccttaggctaataactacatttctgggtcaacacattgtcaattgcctcccaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttccttaggctaataactacatttctgggtcaacacattgtcaattgcctcccaatg 320
Query: 121 tgccaaagtagatggtagattttctaatgctgagacattcatctcctcccaggacattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tgccaaagtagatggtagattttctaatgctgagacattcatctcctcccaggacatac- 379
Query: 181 atgccttattagattctggtgttttattttattacaactctggatttcgtttgctcatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgccttattagattctggtgttttattttattacaactctggatttcgtttgctcatat 439
Query: 241 tta 243
|||
Sbjct: 440 tta 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 644
Length adjustment: 9
Effective length of query: 236
Effective length of database: 635
Effective search space: 149860
Effective search space used: 149860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no386_l10.g1 MSMg01no386_l10.g1 CHROMAT_FILE:
MSMg01no386_l10.g1 PHD_FILE: MSMg01no386_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:35 2005
(241 letters)
>mm_chr11_66234614_66235254
Length = 641
Score = 404 bits (209), Expect = e-117
Identities = 233/241 (96%)
Strand = Plus / Minus
Query: 1 acctattatagagattgtgtccaggcacagttagctggggtacttaataatcaaggtgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acctattatagagattgtgtccaggcacagttagctggggtacttaataatcaaggtgta 264
Query: 61 aatctgtgcaactacctacaccaagcagagactgtgctatccgaggcttccagggtgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatctgtgcaactacctacaccaagcagagactgtgctatccgaggcttccagggtgttt 204
Query: 121 ctcgctctggctctggctctggctctggctctggctctggctctggctctggctctggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ctcgctctggctctggctctggctctggctctggctctggctctggctctggctctggct 144
Query: 181 ctggctctggctctggctctggctctggctctggctctggctctggctctgcctctggct 240
||||||||| ||||| ||||| ||||| ||||| ||||| ||||| ||||| ||||||||
Sbjct: 143 ctggctctgcctctgcctctgcctctgcctctgcctctgcctctgcctctggctctggct 84
Query: 241 c 241
|
Sbjct: 83 c 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 77
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
