Query= MSMg01no387_k23.b1 MSMg01no387_k23.b1 CHROMAT_FILE:
MSMg01no387_k23.b1 PHD_FILE: MSMg01no387_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:48 2005
(419 letters)
>mm_chr11_46002526_46003344
Length = 819
Score = 714 bits (369), Expect = 0.0
Identities = 405/417 (97%), Gaps = 2/417 (0%)
Strand = Plus / Plus
Query: 4 gaattcttttgatttttcttccatttctgcttcgtggctaccatattttgaaaatcattc 63
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 204 gaattcttttgatttttcttccatttctgctttgtggctaccatattttgagaatcattc 263
Query: 64 caagctgttaagagcctgatgttgattgcccacatctggatactcctatcctcactccca 123
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 264 caagctgttaagagcctgatgttgattgcccacagctggatactcctatcctcactctca 323
Query: 124 cactggagggtttgatatcaggatttctatcactctggagtatacagcccttggaaattt 183
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 324 cactggagggtttgatatcaggatttctatcactctgaagtatacag-ccttggaaattt 382
Query: 184 tagctgagtcattact-tttttccccctcttttaaacttcagactagggctggaatgact 242
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 383 tagctgagtcattactattttttcccctcttttaaacttcagactagggctggaatgact 442
Query: 243 ttctattcccattataccccataatattctgaacatggttctgaatgacgcacgtcattg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttctattcccattataccccataatattctgaacatggttctgaatgacgcacgtcattg 502
Query: 303 ttttgtgcttttgtgaactctatgagttaacaggcttttgtttgggcttaatgtatctct 362
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttttgtgcttttgtggactttatgagttaacaggcttttgtttgggcttaatgtatctct 562
Query: 363 ttatcagttttcataaggctgcagtggtaataaactccctcttacgagtcgcttgga 419
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 563 ttatcagttttcataaggctgcagtggtaataaactccctcctaggagtcgcttgga 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_k23.g1 MSMg01no387_k23.g1 CHROMAT_FILE:
MSMg01no387_k23.g1 PHD_FILE: MSMg01no387_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:49 2005
(404 letters)
>mm_chr11_46169199_46169999
Length = 801
Score = 642 bits (332), Expect = 0.0
Identities = 387/406 (95%), Gaps = 7/406 (1%)
Strand = Plus / Minus
Query: 1 tctgggaatgggctgtgtctattccctgccgtgggatctgattgccctttct-acattaa 59
|||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||||
Sbjct: 601 tctgggaatgggctgtgtctattccctgccatgggatctgattcccctttctga-attaa 543
Query: 60 agtgtttgtaaaatgggctcttgaggccctgctagcctctgatttgatggatctgggcaa 119
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agtgttggtaaaatgggctcttgaggccctgctagcctctgatttgatggatctgggcaa 483
Query: 120 gcctgtgaatcagatgagccaacataggaacaaatagatttctgtgaaaagtaaatggct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gcctgtgaatcagatgagccaacataggaacaaatagatttctgtgaaaagtaaatggct 423
Query: 180 tcttggaattcactgggatcagcatctacctcacagaatgcaggaagtggggaactgctg 239
||||||||||||||||||| |||||||| || ||||||||||||||||||| |||||||
Sbjct: 422 tcttggaattcactgggatgggcatctac-tcgcagaatgcaggaagtgggggactgctg 364
Query: 240 ctgtgtgtatctgttcagctccacaaaattctaactcacacagaatgcctacttgacgaa 299
||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||
Sbjct: 363 ttgtgtgtatctgttcagctccacaa--ttctaactcacacataatgcctacttgatgaa 306
Query: 300 agcaactgcctctgcaaaca-accccagtggatagagagagccgacaggctgacctaaac 358
||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgcaactgcctctgcaaa-agaccccagtggatagagagagccgacaggctgacctaaac 247
Query: 359 taaatccaggatccatggactcaccccctgctcttgtctttgcttg 404
|||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 246 taaatccaggatccatggactcactccctgctcttgtctttgcttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 404
Length of database: 801
Length adjustment: 9
Effective length of query: 395
Effective length of database: 792
Effective search space: 312840
Effective search space used: 312840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
