Query= MSMg01no388_e12.b1 MSMg01no388_e12.b1 CHROMAT_FILE:
MSMg01no388_e12.b1 PHD_FILE: MSMg01no388_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:35 2005
(513 letters)
>mm_chr11_34735478_34736389
Length = 912
Score = 971 bits (502), Expect = 0.0
Identities = 508/510 (99%), Gaps = 1/510 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctggaactgaatgaaaatgaaaacacaatatactggagtttaattttgtttaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctggaactgaatgaaaatgaaaacacaatatactggagtttaattttgtttaa 263
Query: 64 tggtagtaagtagtagctttgggctacttcaaaagtccagaatattctcttttacatgac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggtagtaagtagtagctttgggctacttcaaaagtccagaatattctcttttacatgac 323
Query: 124 actgtttttgaacaaaggtacttgttaagataataagcatacaccctaactcctcttttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 actgtttttgaacaaaggtacttgttaagataataagcatacaccctaactcctcttttg 383
Query: 184 aaagtcattatcattgcttaccgattcatttacccagatactcaacaaactttagataca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaagtcattatcattgcttaccgattcatttacccagatactcaacaaactttagataca 443
Query: 244 cactagacactgttatttatatgaaatccagggtaattataatcctcttcctgcattcta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cactagacactgttatttatatgaaatccagggtaattataatcctcttcctgcattcta 503
Query: 304 tgattgttgttatctctgggcatgatgcatattaaataattctgcaagtaagtttttaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgattgttgttatctctgggcatgatgcatattaaataattctgcaagtaagtttttaaa 563
Query: 364 gtagtacaaaggaaaggcagagttgtaataagaatgtggaaacaaacaatcaacaccccc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtagtacaaaggaaaggcagagttgtaataagaatgtggaaacaaacaatcaacaccccc 623
Query: 424 cccaaaaaaaaacctagttggtgagatggatacatggctcagtgatacaccattcttttt 483
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccccaaaaaaa-cctagttggtgagatggatacatggctcagtgatacaccattcttttt 682
Query: 484 ttttaattaggtattttcttcatttacatt 513
||||||||||||||||||||||||||||||
Sbjct: 683 ttttaattaggtattttcttcatttacatt 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 912
Length adjustment: 10
Effective length of query: 503
Effective length of database: 902
Effective search space: 453706
Effective search space used: 453706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_e12.g1 MSMg01no388_e12.g1 CHROMAT_FILE:
MSMg01no388_e12.g1 PHD_FILE: MSMg01no388_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:35 2005
(340 letters)
>mm_chr11_34876795_34877536
Length = 742
Score = 538 bits (278), Expect = e-157
Identities = 321/346 (92%), Gaps = 21/346 (6%)
Strand = Plus / Minus
Query: 1 catgtgcttgttaaaataaccacagaggaaagagaagaagacagaccaagagataagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 catgtgcttgttaaaataaccacagaggaaagagaagaagacagaccaagagataagagt 446
Query: 61 gaattctaaacctaatatgggactgggaggaagcaaaggacagcagtaaggggtggtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaattctaaacctaatatgggactgggaggaagcaaaggacagcagtaaggggtggtgaa 386
Query: 121 gatcagaattagtatgacaaagtcaagtcagccgtaaagtcaccaaatgtgagactgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatcagaattagtatgacaaagtcaagtcagccgtaaagtcaccaaatgtgagactgatg 326
Query: 181 gtgaacaggggaaaagagaaagtgagatgaggagtggggagggagacggctgctgccttt 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 gtgaacaggggaaaagagaaagtgagatgaggagtggggagggagacagctgctgccttt 266
Query: 241 gtttttt------cttcgaattgacagagagctgtgtgtcttgactgtgttgaatac-cc 293
|| ||||||||||||||||||||||||||| |||||||| ||||||| ||
Sbjct: 265 gt-----gagaaccttcgaattgacagagagctgtgtgtcatgactgtggtgaatacacc 211
Query: 294 aatcaatggatgtaattaaatcacccacaattcagcacacacccac 339
|| ||||||| |||| |||||||||||||||||||||||
Sbjct: 210 aaccaatgga----atta-----cccacaattcagcacacacccac 174
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 742
Length adjustment: 9
Effective length of query: 331
Effective length of database: 733
Effective search space: 242623
Effective search space used: 242623
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
