Query= MSMg01no388_e20.b1 MSMg01no388_e20.b1 CHROMAT_FILE:
MSMg01no388_e20.b1 PHD_FILE: MSMg01no388_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:36 2005
(463 letters)
>mm_chr11_22080980_22081844
Length = 865
Score = 830 bits (429), Expect = 0.0
Identities = 453/461 (98%), Gaps = 2/461 (0%)
Strand = Plus / Minus
Query: 5 gaatt-aagagcattgttgggggcctgaccatgtagggcttgctgatattcctaaggtgt 63
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 665 gaattcaagagcattgttgggggcctgaccacgtagggcttgctgatattcctaaggtgt 606
Query: 64 gctgtgctgggtgttacatggcagtggagacccttgggtaaatgagggctggaatgtgac 123
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 605 gctgtgctgggtgttacatggcagtggagacccttgggtaaatgagggctgggatgtgac 546
Query: 124 tttaaatgtcttttgttgagaataactgtaaataaagacaagggcagcaagactggttcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 545 tttaaatgtcttttgttgagaataactgtaaataaagacaagggcagcaagcctggttcc 486
Query: 184 cagttgcattgattcagttcaggcggatgaccggaacctgcttgag-agcttatgtgtgc 242
|||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||
Sbjct: 485 cagttgcattgattcagttcaggcagatgaccagaacctgcttgagaagcttatgtgtgc 426
Query: 243 tcaggaagaggcgtggttcattggaagtgttcttcagagtctacgggaaggtggcctgtg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tcaggaagaggcgtggttcattggaagtgttcttcagagtctacgggaaggtggcctgtg 366
Query: 303 tcttgagcagctttacagtctcttacttgtttactgattggtctgtgtgtgctagaaaat 362
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 365 tcttgagcagctttacagtctctcacttgtttactgattggtctgtgtgtgctagaaaat 306
Query: 363 atcccagacctcattttcgaacatatctgttgtccttaccacataggatataaacaatcg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atcccagacctcattttcgaacatatctgttgtccttaccacataggatataaacaatcg 246
Query: 423 ggtgctgcaggtgagtttacacaaaagtgatctattgtaga 463
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggtgctgcaggtgagtttacacaaaagtgatctattgtaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 865
Length adjustment: 10
Effective length of query: 453
Effective length of database: 855
Effective search space: 387315
Effective search space used: 387315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_e20.g1 MSMg01no388_e20.g1 CHROMAT_FILE:
MSMg01no388_e20.g1 PHD_FILE: MSMg01no388_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:36 2005
(476 letters)
>mm_chr11_21945150_21946025
Length = 876
Score = 897 bits (464), Expect = 0.0
Identities = 473/476 (99%)
Strand = Plus / Plus
Query: 1 tcaaactgcagattagaaaattaaactatttcctgattacatattaatggagcacaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaactgcagattagaaaattaaactatttcctgattacatattaatggagcacaacaa 260
Query: 61 tagcagttgccataagcttggaaggcaaccaagggataaatctgtgtacttaattaccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagcagttgccataagcttggaaggcaaccaagggataaatctgtgtacttaattaccat 320
Query: 121 aaacaatggctgcatagaaatgaagttttatgcacattcccttctgtaatatgtctgata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacaatggctgcatagaaatgaagttttatgcacattcccttctgtaatatgtctgata 380
Query: 181 tcagtacacacttgacaattcttgttcaattatctctattatttaatgcgctgtgaacgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagtacacacttgacaattcttgttcaattatctctattatttaatgcgctgtgaacgg 440
Query: 241 ttctgtgtaaataaaattaaccaccccaattactttgaattcatctagggacaacataat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctctgtgtaaataaaattaaccaccccaattactttgaattcatctagggacaacataat 500
Query: 301 aaaaaaatgtgaagaattctgcatgcctattaatctaacacattacagaagctttcccat 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 aaaaaaatgtgaagaattctgcatgcctattaatctaaaacattacagaagctttcccat 560
Query: 361 attctcttgcctatatttattttgtctacatttattttactgccctgctaattcaattac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attctcttgcctatatttattttgtctacatttattttactgccctgctaattcaattac 620
Query: 421 atttaccatagatggtcaatggagtttttatttaattaatctttatatagcaccac 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atttaccatagatggtcaatggagtttttatttaattaatctttatatagcaccac 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
